RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 TMEM114B3SHH9 223 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 CFLARO15519 480 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 DYNC1LI2O43237 492 aaPredicted RBP12.11□□□□□ -0.47
LTBR-203ENST00000441074 TNNC2P02585 160 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 ZNF24P17028 368 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 ADSLP30566 484 aaPredicted RBP12.11□□□□□ -0.47
LTBR-203ENST00000441074 BCAP31P51572 246 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 SLC5A3P53794 718 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 NAB1Q13506 487 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 HERC3Q15034 1050 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 CCDC153Q494R4 210 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 PPM1LQ5SGD2 360 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 PLPPR4Q7Z2D5 763 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 XYLT1Q86Y38 959 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 CDKL2Q92772 493 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 C12orf43Q96C57 262 aaKnown RBP12.11□□□□□ -0.47
LTBR-203ENST00000441074 RCN3Q96D15 328 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 PEBP4Q96S96 227 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 C16orf70Q9BSU1 422 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 PAIP1Q9H074 479 aaKnown RBP12.11□□□□□ -0.47
LTBR-203ENST00000441074 WDR41Q9HAD4 459 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.11□□□□□ -0.47
LTBR-203ENST00000441074 SELENONQ9NZV5 590 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.11□□□□□ -0.47
LTBR-203ENST00000441074 A0A087WXM4 84 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 CLASP2O75122 1294 aaKnown RBP12.1□□□□□ -0.47
LTBR-203ENST00000441074 TFPTP0C1Z6 253 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 OCM2P0CE71 109 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 OCMP0CE72 109 aaPredicted RBP12.1□□□□□ -0.47
LTBR-203ENST00000441074 CD19P15391 556 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 TGM2P21980 687 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 GJA8P48165 433 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 IL23RQ5VWK5 629 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 FIBCD1Q8N539 461 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 DDHD1Q8NEL9 900 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 ADAMTS16Q8TE57 1224 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 GTF3C2Q8WUA4 911 aaPredicted RBP12.1□□□□□ -0.47
LTBR-203ENST00000441074 USP13Q92995 863 aaPredicted RBP12.1□□□□□ -0.47
LTBR-203ENST00000441074 ANKRD36BP1Q96IX9 119 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 RMI1Q9H9A7 625 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 PRDM16Q9HAZ2 1276 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 ERAP1Q9NZ08 941 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 CYTH4Q9UIA0 394 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 CPSF3Q9UKF6 684 aaKnown RBP12.1□□□□□ -0.47
LTBR-203ENST00000441074 AP4S1Q9Y587 144 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 H3BRB1 525 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 INO80B-WBP1J3KQ70 363 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 PSMD12O00232 456 aaPredicted RBP12.1□□□□□ -0.47
LTBR-203ENST00000441074 MSCO60682 206 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 ENO3P13929 434 aaPredicted RBP12.1□□□□□ -0.47
LTBR-203ENST00000441074 DPP6P42658 865 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 C21orf59P57076 290 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 CAP1Q01518 475 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 KCTD21Q4G0X4 260 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 SCARA5Q6ZMJ2 495 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 TMEM192Q8IY95 271 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 RNF148Q8N7C7 305 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 TDRD5Q8NAT2 981 aaKnown RBP12.1□□□□□ -0.47
LTBR-203ENST00000441074 PLEKHA8Q96JA3 519 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 ANKRD60Q9BZ19 345 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 XYLT2Q9H1B5 865 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 TUT1Q9H6E5 874 aaKnown RBP12.1□□□□□ -0.47
LTBR-203ENST00000441074 EFCAB1Q9HAE3 211 aa12.1□□□□□ -0.47
LTBR-203ENST00000441074 PTBP2Q9UKA9 531 aaKnown RBP12.1□□□□□ -0.47
LTBR-203ENST00000441074 TRIM38O00635 465 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 GAS2O43903 313 aaKnown RBP12.09□□□□□ -0.47
LTBR-203ENST00000441074 BAIAP3O94812 1187 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 C22orf31O95567 290 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 P4HA1P13674 534 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 NELFEP18615 380 aaKnown RBP12.09□□□□□ -0.47
LTBR-203ENST00000441074 BEX3Q00994 111 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 ART3Q13508 389 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 LAMC2Q13753 1193 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 PPM1JQ5JR12 505 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 DCLRE1AQ6PJP8 1040 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 CYP4V2Q6ZWL3 525 aaPredicted RBP12.09□□□□□ -0.47
LTBR-203ENST00000441074 ZBTB8OSQ8IWT0 167 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 UNC5BQ8IZJ1 945 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 PPTC7Q8NI37 304 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 ATP6V1E2Q96A05 226 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 THAP11Q96EK4 314 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 MCRS1Q96EZ8 462 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 ACO2Q99798 780 aaKnown RBP12.09□□□□□ -0.47
LTBR-203ENST00000441074 NEURL2Q9BR09 285 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 CFHR5Q9BXR6 569 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 SETD4Q9NVD3 440 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 SAGE1Q9NXZ1 904 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 IPO11Q9UI26 975 aaKnown RBP12.09□□□□□ -0.47
LTBR-203ENST00000441074 IGKV6-21A0A0C4DH24 114 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 APOL1O14791 398 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 B4GALT4O60513 344 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 ADAM23O75077 832 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 TADA2AO75478 443 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 GCATO75600 419 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 DGKIO75912 1065 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 METTL18O95568 372 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 FUCA1P04066 466 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 ERBB2P04626 1255 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 INHBBP09529 407 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 HOXC6P09630 235 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms