RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 CNTD1Q8N815 330 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 C3orf58Q8NDZ4 430 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 IPMKQ8NFU5 416 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 GAD1Q99259 594 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 GPAMQ9HCL2 828 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 CASS4Q9NQ75 786 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 ZDHHC2Q9UIJ5 367 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 FBXW11Q9UKB1 542 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 ARHGAP26Q9UNA1 814 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 CCNT2O60583 730 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 VAPBO95292 243 aa13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 MYL3P08590 195 aa13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 GABRB3P28472 473 aa13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 PPIDQ08752 370 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 LSM12Q3MHD2 195 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 FBXW8Q8N3Y1 598 aa13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 SLC2A13Q96QE2 648 aa13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 SIKE1Q9BRV8 207 aa13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 AK5Q9Y6K8 562 aa13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 AHSGP02765 367 aa13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 PAPOLAP51003 745 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 MSLNQ13421 630 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 MFSD10Q14728 455 aa13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 RASIP1Q5U651 963 aa13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 KCTD11Q693B1 232 aa13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 IL31Q6EBC2 164 aa13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 FAM156AQ8NDB6 213 aa13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 IFT43Q96FT9 208 aa13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 ZNF419Q96HQ0 510 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 GCNAQ96QF7 691 aa13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 ILKAPQ9H0C8 392 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 ZCWPW1Q9H0M4 648 aa13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 GBA3Q9H227 469 aa13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 TSPYL2Q9H2G4 693 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 SLC2A6Q9UGQ3 507 aa13.79□□□□□ -0.2
HERPUD1-204ENST00000439977 CAPN8A6NHC0 703 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 XPOTO43592 962 aaKnown RBP13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 SBK3P0C264 359 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 ENO3P13929 434 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 ETS2P15036 469 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 KCNE1P15382 129 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 TFEBP19484 476 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 WARSP23381 471 aaKnown RBP13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 OLFML2BQ68BL8 750 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 SDCCAG8Q86SQ7 713 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 FAM35AQ86V20 835 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 PDSS2Q86YH6 399 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 RNF135Q8IUD6 432 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 SNX31Q8N9S9 440 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 CDRT15Q96T59 188 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 STN1Q9H668 368 aaKnown RBP13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 SUDS3Q9H7L9 328 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 SMIM35A0A1B0GVV1 85 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 NEMP2A6NFY4 417 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 CTSHP09668 335 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 ALOX15P16050 662 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 IRX1P78414 480 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 NAB1Q13506 487 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 FSCBQ5H9T9 825 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 NOMO2Q5JPE7 1267 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 PDZD4Q76G19 769 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 BNIPLQ7Z465 357 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 FSTL5Q8N475 847 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 BRI3BPQ8WY22 251 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 OXSMQ9NWU1 459 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 MIOSQ9NXC5 875 aa13.78□□□□□ -0.2
HERPUD1-204ENST00000439977 PMPCBO75439 489 aa13.77□□□□□ -0.2
HERPUD1-204ENST00000439977 ATP5BP06576 529 aaKnown RBP13.77□□□□□ -0.2
HERPUD1-204ENST00000439977 PIK3R1P27986 724 aa13.77□□□□□ -0.2
HERPUD1-204ENST00000439977 CDK7P50613 346 aa13.77□□□□□ -0.2
HERPUD1-204ENST00000439977 MRPS22P82650 360 aaKnown RBP13.77□□□□□ -0.2
HERPUD1-204ENST00000439977 SEMA3BQ13214 749 aa13.77□□□□□ -0.2
HERPUD1-204ENST00000439977 ESRP1Q6NXG1 681 aaKnown RBP13.77□□□□□ -0.2
HERPUD1-204ENST00000439977 TMC7Q7Z402 723 aa13.77□□□□□ -0.2
HERPUD1-204ENST00000439977 CLEC14AQ86T13 490 aa13.77□□□□□ -0.2
HERPUD1-204ENST00000439977 TLK2Q86UE8 772 aa13.77□□□□□ -0.2
HERPUD1-204ENST00000439977 CEP97Q8IW35 865 aa13.77□□□□□ -0.2
HERPUD1-204ENST00000439977 TOP6BLQ8N6T0 577 aa13.77□□□□□ -0.2
HERPUD1-204ENST00000439977 NXNL1Q96CM4 212 aa13.77□□□□□ -0.2
HERPUD1-204ENST00000439977 RCN3Q96D15 328 aa13.77□□□□□ -0.2
HERPUD1-204ENST00000439977 KLHL4Q9C0H6 718 aa13.77□□□□□ -0.2
HERPUD1-204ENST00000439977 XPR1Q9UBH6 696 aa13.77□□□□□ -0.2
HERPUD1-204ENST00000439977 INPP5FQ9Y2H2 1132 aa13.77□□□□□ -0.2
HERPUD1-204ENST00000439977 AURKAO14965 403 aa13.77□□□□□ -0.21
HERPUD1-204ENST00000439977 STRNO43815 780 aa13.77□□□□□ -0.21
HERPUD1-204ENST00000439977 F2P00734 622 aa13.77□□□□□ -0.21
HERPUD1-204ENST00000439977 HNRNPLP14866 589 aaKnown RBP eCLIP13.77□□□□□ -0.21
HERPUD1-204ENST00000439977 BDNFP23560 247 aa13.77□□□□□ -0.21
HERPUD1-204ENST00000439977 EPHX2P34913 555 aa13.77□□□□□ -0.21
HERPUD1-204ENST00000439977 MAGEA12P43365 314 aa13.77□□□□□ -0.21
HERPUD1-204ENST00000439977 DBN1Q16643 649 aa13.77□□□□□ -0.21
HERPUD1-204ENST00000439977 MMEL1Q495T6 779 aa13.77□□□□□ -0.21
HERPUD1-204ENST00000439977 C9orf131Q5VYM1 1079 aa13.77□□□□□ -0.21
HERPUD1-204ENST00000439977 SEL1L3Q68CR1 1132 aa13.77□□□□□ -0.21
HERPUD1-204ENST00000439977 ZC3HC1Q86WB0 502 aaKnown RBP13.77□□□□□ -0.21
HERPUD1-204ENST00000439977 TMEM151AQ8N4L1 468 aa13.77□□□□□ -0.21
HERPUD1-204ENST00000439977 SCAMP5Q8TAC9 235 aa13.77□□□□□ -0.21
HERPUD1-204ENST00000439977 KCTD13Q8WZ19 329 aa13.77□□□□□ -0.21
HERPUD1-204ENST00000439977 PPP2R3CQ969Q6 453 aa13.77□□□□□ -0.21
HERPUD1-204ENST00000439977 TEKT5Q96M29 485 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms