RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 CYP4V2Q6ZWL3 525 aaPredicted RBP18.21■□□□□ 0.51
NCSTN-208ENST00000438008 NIPA2Q8N8Q9 360 aa18.21■□□□□ 0.51
NCSTN-208ENST00000438008 SNRNP25Q9BV90 132 aaKnown RBP18.21■□□□□ 0.51
NCSTN-208ENST00000438008 TRIM5Q9C035 493 aa18.21■□□□□ 0.51
NCSTN-208ENST00000438008 CEP44Q9C0F1 390 aa18.21■□□□□ 0.51
NCSTN-208ENST00000438008 RXFP3Q9NSD7 469 aa18.21■□□□□ 0.51
NCSTN-208ENST00000438008 DONSONQ9NYP3 566 aa18.21■□□□□ 0.51
NCSTN-208ENST00000438008 PCSK1NQ9UHG2 260 aa18.21■□□□□ 0.51
NCSTN-208ENST00000438008 CDV3Q9UKY7 258 aaKnown RBP18.21■□□□□ 0.51
NCSTN-208ENST00000438008 PPM1HQ9ULR3 514 aa18.21■□□□□ 0.51
NCSTN-208ENST00000438008 FZD4Q9ULV1 537 aa18.21■□□□□ 0.51
NCSTN-208ENST00000438008 SLC30A4O14863 429 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 SMAD6O43541 496 aaKnown RBP18.2■□□□□ 0.5
NCSTN-208ENST00000438008 SEMA4FO95754 770 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 CD160O95971 181 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 IL1BP01584 269 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 GOT1P17174 413 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 PSMD8P48556 350 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 SERPINH1P50454 418 aaKnown RBP18.2■□□□□ 0.5
NCSTN-208ENST00000438008 ZNF135P52742 658 aaPredicted RBP18.2■□□□□ 0.5
NCSTN-208ENST00000438008 ADKP55263 362 aaKnown RBP18.2■□□□□ 0.5
NCSTN-208ENST00000438008 YBEYP58557 167 aaPredicted RBP18.2■□□□□ 0.5
NCSTN-208ENST00000438008 POLD3Q15054 466 aaPredicted RBP18.2■□□□□ 0.5
NCSTN-208ENST00000438008 CA9Q16790 459 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 TRIM61Q5EBN2 209 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 DCAF12L1Q5VU92 463 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 FAM46CQ5VWP2 391 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 CNGA4Q8IV77 575 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 OR2A12Q8NGT7 310 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 FAM131CQ96AQ9 280 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 ARHGEF26Q96DR7 871 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 CCDC114Q96M63 670 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 NUP85Q9BW27 656 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 RBSNQ9H1K0 784 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 DHX35Q9H5Z1 703 aaKnown RBP18.2■□□□□ 0.5
NCSTN-208ENST00000438008 NOL6Q9H6R4 1146 aaKnown RBP18.2■□□□□ 0.5
NCSTN-208ENST00000438008 GPATCH2LQ9NWQ4 482 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 SERGEFQ9UGK8 458 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 SUSD2Q9UGT4 822 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 IP6K2Q9UHH9 426 aa18.2■□□□□ 0.5
NCSTN-208ENST00000438008 TNRC6BQ9UPQ9 1833 aaKnown RBP18.2■□□□□ 0.5
NCSTN-208ENST00000438008 ATXN2Q99700 1313 aaKnown RBP18.2■□□□□ 0.5
NCSTN-208ENST00000438008 A0A1W2PP55 124 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 LNP1A1A4G5 178 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 MEI4A8MW99 385 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 C10orf142B7Z368 130 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 AKR1B15C9JRZ8 316 aaPredicted RBP18.19■□□□□ 0.5
NCSTN-208ENST00000438008 KDELR3O43731 214 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 ZNF821O75541 412 aaPredicted RBP18.19■□□□□ 0.5
NCSTN-208ENST00000438008 SERPINF2P08697 491 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 GEMIN4P57678 1058 aaKnown RBP18.19■□□□□ 0.5
NCSTN-208ENST00000438008 TPI1P60174 286 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 IRX4P78413 519 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 BOLA3Q53S33 107 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 RALGAPA1Q6GYQ0 2036 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 C22orf39Q6P5X5 142 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 RGL4Q8IZJ4 473 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 UMODL1-AS1Q8N2C9 162 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 HDDC3Q8N4P3 179 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 AADATQ8N5Z0 425 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 PCDH20Q8N6Y1 951 aaKnown RBP18.19■□□□□ 0.5
NCSTN-208ENST00000438008 GANCQ8TET4 914 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 CHP1Q99653 195 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 OMDQ99983 421 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 RTKNQ9BST9 563 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 NUSAP1Q9BXS6 441 aaKnown RBP18.19■□□□□ 0.5
NCSTN-208ENST00000438008 NEUROG2Q9H2A3 272 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 DEF6Q9H4E7 631 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 C6orf106Q9H6K1 298 aaPredicted RBP18.19■□□□□ 0.5
NCSTN-208ENST00000438008 CAPN10Q9HC96 672 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 ANAPC7Q9UJX3 599 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 SARDHQ9UL12 918 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 HPCAL4Q9UM19 191 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 SLC6A14Q9UN76 642 aa18.19■□□□□ 0.5
NCSTN-208ENST00000438008 FARP1Q9Y4F1 1045 aaPredicted RBP18.19■□□□□ 0.5
NCSTN-208ENST00000438008 NUP205Q92621 2012 aa18.18■□□□□ 0.5
NCSTN-208ENST00000438008 ZSCAN5CA6NGD5 496 aaPredicted RBP18.18■□□□□ 0.5
NCSTN-208ENST00000438008 C1QTNF3-AMACRE9PGA6 284 aa18.18■□□□□ 0.5
NCSTN-208ENST00000438008 MYO1FO00160 1098 aa18.18■□□□□ 0.5
NCSTN-208ENST00000438008 RNASEH2AO75792 299 aaKnown RBP18.18■□□□□ 0.5
NCSTN-208ENST00000438008 GNSP15586 552 aa18.18■□□□□ 0.5
NCSTN-208ENST00000438008 IL1R2P27930 398 aa18.18■□□□□ 0.5
NCSTN-208ENST00000438008 DRD3P35462 400 aa18.18■□□□□ 0.5
NCSTN-208ENST00000438008 HCAR3P49019 387 aa18.18■□□□□ 0.5
NCSTN-208ENST00000438008 PARP15Q460N3 678 aa18.18■□□□□ 0.5
NCSTN-208ENST00000438008 PLPP6Q8IY26 295 aa18.18■□□□□ 0.5
NCSTN-208ENST00000438008 TMIEQ8NEW7 156 aa18.18■□□□□ 0.5
NCSTN-208ENST00000438008 PIP4K2CQ8TBX8 421 aa18.18■□□□□ 0.5
NCSTN-208ENST00000438008 ISG20Q96AZ6 181 aaKnown RBP18.18■□□□□ 0.5
NCSTN-208ENST00000438008 KCTD15Q96SI1 283 aaPredicted RBP18.18■□□□□ 0.5
NCSTN-208ENST00000438008 EDEM2Q9BV94 578 aa18.18■□□□□ 0.5
NCSTN-208ENST00000438008 NHEJ1Q9H9Q4 299 aaPredicted RBP18.18■□□□□ 0.5
NCSTN-208ENST00000438008 UVRAGQ9P2Y5 699 aa18.18■□□□□ 0.5
NCSTN-208ENST00000438008 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.18■□□□□ 0.5
NCSTN-208ENST00000438008 DMXL1Q9Y485 3027 aa18.17■□□□□ 0.5
NCSTN-208ENST00000438008 CEP250Q9BV73 2442 aa18.17■□□□□ 0.5
NCSTN-208ENST00000438008 EEF2KO00418 725 aaKnown RBP18.17■□□□□ 0.5
NCSTN-208ENST00000438008 SLC7A4O43246 635 aa18.17■□□□□ 0.5
NCSTN-208ENST00000438008 AKR1B10O60218 316 aa18.17■□□□□ 0.5
NCSTN-208ENST00000438008 H2AFZP0C0S5 128 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms