RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 B4GALNT4Q76KP1 1039 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 GET4Q7L5D6 327 aaPredicted RBP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 CHSY1Q86X52 802 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 CIR1Q86X95 450 aaPredicted RBP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 DDX42Q86XP3 938 aaKnown RBP eCLIP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 BBS7Q8IWZ6 715 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 CFAP52Q8N1V2 620 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 MICALL1Q8N3F8 863 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 CCDC33Q8N5R6 958 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 RTL3Q8N8U3 475 aaKnown RBP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 MYLIPQ8WY64 445 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 P3H4Q92791 437 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 RPRD1AQ96P16 312 aaPredicted RBP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 OLFM3Q96PB7 478 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 TCF12Q99081 682 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 CDX2Q99626 313 aaPredicted RBP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 FRMD8P1Q9BZ68 369 aaPredicted RBP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 EPC1Q9H2F5 836 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 SLITRK6Q9H5Y7 841 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 NOL6Q9H6R4 1146 aaKnown RBP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 C10orf88Q9H8K7 445 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 HOMER3Q9NSC5 361 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 NDFIP2Q9NV92 336 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 DTLQ9NZJ0 730 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 MARK1Q9P0L2 795 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 ZFATQ9P243 1243 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 PCYOX1Q9UHG3 505 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 AMACRQ9UHK6 382 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 LSM7Q9UK45 103 aaKnown RBP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 CDH7Q9ULB5 785 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 DRG1Q9Y295 367 aaKnown RBP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 TMA7Q9Y2S6 64 aaKnown RBP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 SH3BP1Q9Y3L3 701 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 NEU2Q9Y3R4 380 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 HEY1Q9Y5J3 304 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 ZFP37Q9Y6Q3 630 aaPredicted RBP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 V9GYY5 206 aaPredicted RBP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 TNRC18O15417 2968 aaPredicted RBP7.21□□□□□ -1.25
LSM3P3-201ENST00000436601 DCDC2BA2VCK2 349 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 CTIFO43310 598 aaKnown RBP7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 RAD51CO43502 376 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 NFKB1P19838 968 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 ITPKAP23677 461 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 FCARP24071 287 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 GBP2P32456 591 aaPredicted RBP7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 MTHFRP42898 656 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 NR2C2P49116 596 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 FNTAP49354 379 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 VCPP55072 806 aaKnown RBP7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 EIF3EP60228 445 aaKnown RBP7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 GALNT2Q10471 571 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 XRCC4Q13426 336 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 BYSLQ13895 437 aaKnown RBP7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 COL9A2Q14055 689 aaPredicted RBP7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 UBAP2LQ14157 1087 aaKnown RBP7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 ERCC6LQ2NKX8 1250 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 TEX35Q5T0J7 233 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 CCDC137Q6PK04 289 aaKnown RBP7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 RIPOR1Q6ZS17 1223 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 TFAP2DQ7Z6R9 452 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 PRUNE1Q86TP1 453 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 ZC3H18Q86VM9 953 aaKnown RBP7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 ARHGAP12Q8IWW6 846 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 UMODL1-AS1Q8N2C9 162 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 CPXM2Q8N436 756 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 CELF5Q8N6W0 485 aaKnown RBP7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 SMRP1Q8NCR6 262 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 ST13P5Q8NFI4 369 aaPredicted RBP7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 MYRIPQ8NFW9 859 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 OR52K2Q8NGK3 314 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 ATL2Q8NHH9 583 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 SUSD6Q92537 303 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 SMARCD2Q92925 531 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 SLCO2A1Q92959 643 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 CELF6Q96J87 481 aaKnown RBP7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 RIPOR3Q96MK2 946 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 GUCD1Q96NT3 240 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 MYADMQ96S97 322 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 DDX50Q9BQ39 737 aaKnown RBP7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 SLC39A8Q9C0K1 460 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 LINC00597Q9H2U6 94 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 POMKQ9H5K3 350 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 CATSPERBQ9H7T0 1116 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 TRPV4Q9HBA0 871 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 USP29Q9HBJ7 922 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 TMEM248Q9NWD8 314 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 GDE1Q9NZC3 331 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 ZNF510Q9Y2H8 683 aa7.21□□□□□ -1.26
LSM3P3-201ENST00000436601 BCLAF3A2AJT9 711 aaKnown RBP7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 H3BQ06 376 aaPredicted RBP7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 H7C0C1 242 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 AXIN1O15169 862 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 TTI1O43156 1089 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 ITGAVP06756 1048 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 THBS1P07996 1170 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 RHOXF2BP0C7M4 288 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 ZSCAN5DPP0CG00 497 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 RBP3P10745 1247 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 LAMP2P13473 410 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms