RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 TEKT5Q96M29 485 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 HIST1H2AAQ96QV6 131 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 CCT8L2Q96SF2 557 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 ADAM2Q99965 735 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 TCF25Q9BQ70 676 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 RUSC1Q9BVN2 902 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 ALDH8A1Q9H2A2 487 aaPredicted RBP11.35□□□□□ -0.59
SCN4A-201ENST00000435607 TMEM138Q9NPI0 162 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 TBC1D30Q9Y2I9 924 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 TBC1D3DA0A087WVF3 549 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 TBC1D3IA0A087WXS9 549 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 TBC1D3EA0A087X179 549 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 TBC1D3KA0A087X1G2 549 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 GPR75-ASB3A0A0A6YYF3 556 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 TBC1D3FA6NER0 549 aaPredicted RBP11.35□□□□□ -0.59
SCN4A-201ENST00000435607 TBC1D3LB9A6J9 549 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 SCGNO76038 276 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 TBC1D3HP0C7X1 549 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 CRATP43155 626 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 GALNT3Q14435 633 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 SUZ12Q15022 739 aaKnown RBP11.35□□□□□ -0.59
SCN4A-201ENST00000435607 TBC1D3GQ6DHY5 549 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 TBC1D3CQ6IPX1 549 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 SLC26A11Q86WA9 606 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 ADHFE1Q8IWW8 467 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 SCUBE1Q8IWY4 988 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 TBC1D3Q8IZP1 549 aaPredicted RBP11.35□□□□□ -0.59
SCN4A-201ENST00000435607 BRINP2Q9C0B6 783 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 PCDHGB5Q9Y5G0 923 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 NPTX2P47972 431 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 POLD2P49005 469 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 OTUD4Q01804 1114 aaKnown RBP11.34□□□□□ -0.59
SCN4A-201ENST00000435607 ATAT1Q5SQI0 421 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 GPR158Q5T848 1215 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 CXXC5Q7LFL8 322 aaKnown RBP11.34□□□□□ -0.59
SCN4A-201ENST00000435607 GPER1Q99527 375 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 CLN6Q9NWW5 311 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 COLEC10Q9Y6Z7 277 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.34□□□□□ -0.59
SCN4A-201ENST00000435607 ORC1Q13415 861 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 MYBPC3Q14896 1274 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 SLC4A11Q8NBS3 891 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 SELENOMQ8WWX9 145 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 ARHGAP9Q9BRR9 750 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 MOXD2PA6NHM9 499 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 LDLRP01130 860 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 S100A9P06702 114 aaKnown RBP11.34□□□□□ -0.59
SCN4A-201ENST00000435607 MYL9P24844 172 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 ELOAQ14241 798 aaKnown RBP11.34□□□□□ -0.59
SCN4A-201ENST00000435607 FAM83AQ86UY5 434 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 PDGFDQ9GZP0 370 aaPredicted RBP11.34□□□□□ -0.59
SCN4A-201ENST00000435607 VPS45Q9NRW7 570 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 CNTNAP4Q9C0A0 1308 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 RAP1GAPP47736 663 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 OLFML2AQ68BL7 652 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.34□□□□□ -0.59
SCN4A-201ENST00000435607 HJURPQ8NCD3 748 aaPredicted RBP11.34□□□□□ -0.59
SCN4A-201ENST00000435607 POP5Q969H6 163 aaKnown RBP11.34□□□□□ -0.59
SCN4A-201ENST00000435607 ZNF607Q96SK3 696 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.34□□□□□ -0.59
SCN4A-201ENST00000435607 ISCUQ9H1K1 167 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.34□□□□□ -0.59
SCN4A-201ENST00000435607 CROTQ9UKG9 612 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 WRBO00258 174 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 RIPOR1Q6ZS17 1223 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 REPS2Q8NFH8 660 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 KLHL4Q9C0H6 718 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 A0A0X1KG70 313 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 SNUPNO95149 360 aaKnown RBP11.34□□□□□ -0.59
SCN4A-201ENST00000435607 USP17L7P0C7H9 530 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 FOXO4P98177 505 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 MTM1Q13496 603 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 NAB1Q13506 487 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 EPC2Q52LR7 807 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 SAMD4BQ5PRF9 694 aaKnown RBP11.34□□□□□ -0.59
SCN4A-201ENST00000435607 SHC4Q6S5L8 630 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 IL27RAQ6UWB1 636 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 NANOGNBQ7Z5D8 188 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 TESCQ96BS2 214 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 C6orf62Q9GZU0 229 aaPredicted RBP11.34□□□□□ -0.59
SCN4A-201ENST00000435607 SLC24A3Q9HC58 644 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 EXD2Q9NVH0 621 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 BTBD7Q9P203 1132 aa11.34□□□□□ -0.59
SCN4A-201ENST00000435607 IQCMA0A1B0GVH7 501 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 MAGEA13PA6NCF6 341 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 FCHO1O14526 889 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 XKRYO14609 159 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 SERPINB7O75635 380 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 TTPAP49638 278 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 OAZ1P54368 228 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 SEZ6Q53EL9 994 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 AADATQ8N5Z0 425 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 KYQ8NBH2 561 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 C5orf34Q96MH7 638 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 HEY2Q9UBP5 337 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 ERVK-7P63135 1459 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 KCNA5P22460 613 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 CALB2P22676 271 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 NUMBP49757 651 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 ARFIP1P53367 373 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms