RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 RBM18Q96H35 190 aaKnown RBP7.46□□□□□ -1.22
GARNL3-205ENST00000435213 POP1Q99575 1024 aaKnown RBP7.46□□□□□ -1.22
GARNL3-205ENST00000435213 CHID1Q9BWS9 393 aa7.46□□□□□ -1.22
GARNL3-205ENST00000435213 UCK1Q9HA47 277 aa7.46□□□□□ -1.22
GARNL3-205ENST00000435213 CPNE5Q9HCH3 593 aa7.46□□□□□ -1.22
GARNL3-205ENST00000435213 TOR4AQ9NXH8 423 aa7.46□□□□□ -1.22
GARNL3-205ENST00000435213 CPNE7Q9UBL6 633 aa7.46□□□□□ -1.22
GARNL3-205ENST00000435213 CCNL1Q9UK58 526 aaPredicted RBP7.46□□□□□ -1.22
GARNL3-205ENST00000435213 TESMINQ9Y4I5 508 aa7.46□□□□□ -1.22
GARNL3-205ENST00000435213 PPP2R3BQ9Y5P8 575 aa7.46□□□□□ -1.22
GARNL3-205ENST00000435213 AP4B1Q9Y6B7 739 aa7.46□□□□□ -1.22
GARNL3-205ENST00000435213 B2RBV5 119 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 CLDN25C9JDP6 229 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 STX16-NPEPL1H3BU86 382 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 PRMT3O60678 531 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 DEAF1O75398 565 aaPredicted RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 VAMP1P23763 118 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 L1CAMP32004 1257 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 SYCE2Q6PIF2 218 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 KYAT3Q6YP21 454 aaKnown RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 FKBP9P1Q75LS8 142 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 DPP9Q86TI2 863 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 HERC6Q8IVU3 1022 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 POU5F2Q8N7G0 328 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 LPGAT1Q92604 370 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 MARC2Q969Z3 335 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 MRRFQ96E11 262 aaKnown RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 RMDN3Q96TC7 470 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 TMEM246Q9BRR3 403 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 FRMD8Q9BZ67 464 aaPredicted RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 WDR12Q9GZL7 423 aaKnown RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 ACAD9Q9H845 621 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 AGPAT3Q9NRZ7 376 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 TRPM5Q9NZQ8 1165 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 SPATA2Q9UM82 520 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 MAFBQ9Y5Q3 323 aaPredicted RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 ARHGAP42A6NI28 874 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 CENPXA8MT69 81 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 FOXO6A8MYZ6 492 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 TSPAN4O14817 238 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 CLDN3O15551 220 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 CSDE1O75534 798 aaKnown RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 DAB1O75553 588 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 SLC4A1P02730 911 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 TRIM49P0CI25 452 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 TRIM49CP0CI26 452 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 STMN1P16949 149 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 HLA-FP30511 346 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 ASMTP46597 345 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 HARS2P49590 506 aaKnown RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 RFTN1Q14699 578 aaPredicted RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 RINT1Q6NUQ1 792 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 UGT3A1Q6NUS8 523 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 PLEKHM3Q6ZWE6 761 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 USP50Q70EL3 339 aaPredicted RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 TMPRSS9Q7Z410 1059 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 NUDCD3Q8IVD9 361 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 C1orf54Q8WWF1 131 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 SLC10A4Q96EP9 437 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 MCRS1Q96EZ8 462 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 PANX3Q96QZ0 392 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 DCLK3Q9C098 648 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 KCNK13Q9HB14 408 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 CYP4F11Q9HBI6 524 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 SSU72Q9NP77 194 aaKnown RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 DDX28Q9NUL7 540 aaKnown RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 POLR3BQ9NW08 1133 aaPredicted RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 ZNF229Q9UJW7 825 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 NOCTQ9UK39 431 aaKnown RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 CHRNB2P17787 502 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 NMT1P30419 496 aaKnown RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 CDH5P33151 784 aaPredicted RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 SERPINB5P36952 375 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 CSNK2BP67870 215 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 GABPAQ06546 454 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 LGALS3BPQ08380 585 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 TOP3AQ13472 1001 aaPredicted RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 PERM1Q5SV97 790 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 RARS2Q5T160 578 aaKnown RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 IKBIPQ70UQ0 350 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 HDDC2Q7Z4H3 204 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 TPH2Q8IWU9 490 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 MYCT1Q8N699 235 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 PHF21AQ96BD5 680 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 TMEM80Q96HE8 168 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 ZFYVE19Q96K21 471 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 ZNF578Q96N58 590 aaPredicted RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 TRABDQ9H4I3 376 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 UBE2TQ9NPD8 197 aaPredicted RBP7.45□□□□□ -1.22
GARNL3-205ENST00000435213 GTF2IRD1Q9UHL9 959 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 ZNF221Q9UK13 617 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 VAV3Q9UKW4 847 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 TRAF6Q9Y4K3 522 aa7.45□□□□□ -1.22
GARNL3-205ENST00000435213 ATRNL1Q5VV63 1379 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 USP17L10C9JJH3 530 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 POLR2MP0CAP2 368 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 PTX3P26022 381 aaPredicted RBP7.44□□□□□ -1.22
GARNL3-205ENST00000435213 CYP2J2P51589 502 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 BNIP3Q12983 259 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms