RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 PPP3CBP16298 524 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 TNFRSF1AP19438 455 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 MCM5P33992 734 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 HNF1BP35680 557 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 CPA2P48052 419 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 VAV2P52735 878 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 MVDP53602 400 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 SUMO2P61956 95 aaKnown RBP7.72□□□□□ -1.17
PTPRK-212ENST00000434424 ARHGAP8P85298 464 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 ALKBH1Q13686 389 aaKnown RBP7.72□□□□□ -1.17
PTPRK-212ENST00000434424 SLC9B1Q4ZJI4 515 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 UBAP2Q5T6F2 1119 aaKnown RBP7.72□□□□□ -1.17
PTPRK-212ENST00000434424 TEDDM1Q5T9Z0 273 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 RRM2BQ7LG56 351 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 TEX11Q8IYF3 940 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 WDTC1Q8N5D0 677 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 NACC2Q96BF6 587 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 PERPQ96FX8 193 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 LBHD1Q9BQE6 289 aaPredicted RBP7.72□□□□□ -1.17
PTPRK-212ENST00000434424 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.72□□□□□ -1.17
PTPRK-212ENST00000434424 ALOXE3Q9BYJ1 711 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 GALNT9Q9HCQ5 603 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 EHD2Q9NZN4 543 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 NWD2Q9ULI1 1742 aa7.72□□□□□ -1.17
PTPRK-212ENST00000434424 YTHDC2Q9H6S0 1430 aaKnown RBP7.71□□□□□ -1.17
PTPRK-212ENST00000434424 LIPT2A6NK58 231 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 C16orf96A6NNT2 1141 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 MYO1GB0I1T2 1018 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 TRIM24O15164 1050 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 CYP27B1O15528 508 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 ARSAP15289 507 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 MATN1P21941 496 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 ICAM3P32942 547 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 EIF2DP41214 584 aaKnown RBP7.71□□□□□ -1.18
PTPRK-212ENST00000434424 DEUP1Q05D60 604 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 CRYMQ14894 314 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 HECTD3Q5T447 861 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 ZKSCAN2Q63HK3 967 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 TCTN3Q6NUS6 607 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 MAMDC4Q6UXC1 1216 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 MAVSQ7Z434 540 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 FRMD1Q8N878 549 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 XAGE5Q8WWM1 108 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 CTHRC1Q96CG8 243 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 CINPQ9BW66 212 aaPredicted RBP7.71□□□□□ -1.18
PTPRK-212ENST00000434424 MAK16Q9BXY0 300 aaKnown RBP7.71□□□□□ -1.18
PTPRK-212ENST00000434424 SIL1Q9H173 461 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 CDCP1Q9H5V8 836 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 TTC12Q9H892 705 aaPredicted RBP7.71□□□□□ -1.18
PTPRK-212ENST00000434424 TMEM74BQ9NUR3 256 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 CEP72Q9P209 647 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 ZNF70Q9UC06 446 aaPredicted RBP7.71□□□□□ -1.18
PTPRK-212ENST00000434424 KLQ9UEF7 1012 aa7.71□□□□□ -1.18
PTPRK-212ENST00000434424 MARF1Q9Y4F3 1742 aaKnown RBP7.71□□□□□ -1.18
PTPRK-212ENST00000434424 OVOS2A0A0G2JMS6 1433 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 OVOS2A0A0J9YW53 1432 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 OVOS2Q6IE36 1432 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 NPIPB13A6NJU9 1138 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 NPIPB5A8MRT5 1133 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 NPIPB4C9JG80 1138 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 PER2O15055 1255 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 MUSKO15146 869 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 AKAP8O43823 692 aaKnown RBP7.7□□□□□ -1.18
PTPRK-212ENST00000434424 HNRNPCL1O60812 293 aaKnown RBP7.7□□□□□ -1.18
PTPRK-212ENST00000434424 SCAF4O95104 1147 aaKnown RBP7.7□□□□□ -1.18
PTPRK-212ENST00000434424 FESP07332 822 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 TMIGD3P0DMS9 266 aaPredicted RBP7.7□□□□□ -1.18
PTPRK-212ENST00000434424 AVPR2P30518 371 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 GCH1P30793 250 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 RPS6KA3P51812 740 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 KRT83P78385 493 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 TXNL4AP83876 142 aaKnown RBP7.7□□□□□ -1.18
PTPRK-212ENST00000434424 TMEM115Q12893 351 aaPredicted RBP7.7□□□□□ -1.18
PTPRK-212ENST00000434424 PRPF4BQ13523 1007 aaKnown RBP7.7□□□□□ -1.18
PTPRK-212ENST00000434424 SLC15A2Q16348 729 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 TMEM266Q2M3C6 531 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 SH2D4BQ5SQS7 431 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 PLEKHS1Q5SXH7 462 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 TMEM88Q6PEY1 159 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 NCEH1Q6PIU2 408 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 DPY19L3Q6ZPD9 716 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 Q6ZRM9 215 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 POMGNT1Q8WZA1 660 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 NCSTNQ92542 709 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 CNOT9Q92600 299 aaKnown RBP7.7□□□□□ -1.18
PTPRK-212ENST00000434424 KLHL29Q96CT2 875 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 PRR11Q96HE9 360 aaPredicted RBP7.7□□□□□ -1.18
PTPRK-212ENST00000434424 SPATA17Q96L03 361 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 ELOVL1Q9BW60 279 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 NPLQ9BXD5 320 aaPredicted RBP7.7□□□□□ -1.18
PTPRK-212ENST00000434424 CCDC177Q9NQR7 707 aaPredicted RBP7.7□□□□□ -1.18
PTPRK-212ENST00000434424 SMPD4Q9NXE4 827 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 MTMR4Q9NYA4 1195 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 MGAT4CQ9UBM8 478 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 MORF4L1Q9UBU8 362 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 VPS4AQ9UN37 437 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 MAP3K2Q9Y2U5 619 aa7.7□□□□□ -1.18
PTPRK-212ENST00000434424 TEX13CA0A0J9YWL9 993 aa7.69□□□□□ -1.18
PTPRK-212ENST00000434424 GCOM1H8Y6P7 765 aaPredicted RBP7.69□□□□□ -1.18
PTPRK-212ENST00000434424 MATN3O15232 486 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms