RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 PARP15Q460N3 678 aa18.77■□□□□ 0.6
HLA-F-220ENST00000434407 PPP6R3Q5H9R7 873 aaPredicted RBP18.77■□□□□ 0.6
HLA-F-220ENST00000434407 ZNF776Q68DI1 518 aaPredicted RBP18.77■□□□□ 0.6
HLA-F-220ENST00000434407 IL31Q6EBC2 164 aa18.77■□□□□ 0.6
HLA-F-220ENST00000434407 RETSATQ6NUM9 610 aa18.77■□□□□ 0.6
HLA-F-220ENST00000434407 LINGO4Q6UY18 593 aa18.77■□□□□ 0.6
HLA-F-220ENST00000434407 RAD9BQ6WBX8 426 aa18.77■□□□□ 0.6
HLA-F-220ENST00000434407 SLC36A4Q6YBV0 504 aa18.77■□□□□ 0.6
HLA-F-220ENST00000434407 STK40Q8N2I9 435 aa18.77■□□□□ 0.6
HLA-F-220ENST00000434407 RUBCNQ92622 972 aa18.77■□□□□ 0.6
HLA-F-220ENST00000434407 BAG1Q99933 345 aaPredicted RBP18.77■□□□□ 0.6
HLA-F-220ENST00000434407 PCDH18Q9HCL0 1135 aa18.77■□□□□ 0.6
HLA-F-220ENST00000434407 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.77■□□□□ 0.6
HLA-F-220ENST00000434407 CYP8B1Q9UNU6 501 aa18.77■□□□□ 0.6
HLA-F-220ENST00000434407 CEP250Q9BV73 2442 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 KNL1Q8NG31 2342 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 A0A0A6YYK5 440 aaPredicted RBP18.76■□□□□ 0.59
HLA-F-220ENST00000434407 RASA4BC9J798 803 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 K7ERQ8 282 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 ALOX15BO15296 676 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 RASA4O43374 803 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 KDELR3O43731 214 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 IL4RP24394 825 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 TAS2R40P59535 323 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 SERINC3Q13530 473 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 MESDQ14696 234 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 ELF2Q15723 593 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 ATP11CQ8NB49 1132 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 HSPH1Q92598 858 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 HMCESQ96FZ2 354 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 CSPG4P5Q96PW8 444 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 CEP44Q9C0F1 390 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 LUC7LQ9NQ29 371 aaKnown RBP18.76■□□□□ 0.59
HLA-F-220ENST00000434407 WSB2Q9NYS7 404 aaPredicted RBP18.76■□□□□ 0.59
HLA-F-220ENST00000434407 RCOR3Q9P2K3 495 aaPredicted RBP18.76■□□□□ 0.59
HLA-F-220ENST00000434407 HPCAL4Q9UM19 191 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 SCML1Q9UN30 329 aa18.76■□□□□ 0.59
HLA-F-220ENST00000434407 REXO2Q9Y3B8 237 aaKnown RBP18.76■□□□□ 0.59
HLA-F-220ENST00000434407 ZSCAN5CA6NGD5 496 aaPredicted RBP18.75■□□□□ 0.59
HLA-F-220ENST00000434407 H3BRJ5 948 aa18.75■□□□□ 0.59
HLA-F-220ENST00000434407 MCF2LO15068 1137 aa18.75■□□□□ 0.59
HLA-F-220ENST00000434407 RNASEH1O60930 286 aaKnown RBP18.75■□□□□ 0.59
HLA-F-220ENST00000434407 EPN2O95208 641 aa18.75■□□□□ 0.59
HLA-F-220ENST00000434407 ACADMP11310 421 aa18.75■□□□□ 0.59
HLA-F-220ENST00000434407 CD6P30203 668 aa18.75■□□□□ 0.59
HLA-F-220ENST00000434407 OXTRP30559 389 aa18.75■□□□□ 0.59
HLA-F-220ENST00000434407 ARL4AP40617 200 aa18.75■□□□□ 0.59
HLA-F-220ENST00000434407 GEMIN4P57678 1058 aaKnown RBP18.75■□□□□ 0.59
HLA-F-220ENST00000434407 ACCSLQ4AC99 568 aa18.75■□□□□ 0.59
HLA-F-220ENST00000434407 ATP13A4Q4VNC1 1196 aa18.75■□□□□ 0.59
HLA-F-220ENST00000434407 C22orf39Q6P5X5 142 aa18.75■□□□□ 0.59
HLA-F-220ENST00000434407 Q6ZVU0 165 aa18.75■□□□□ 0.59
HLA-F-220ENST00000434407 USP30Q70CQ3 517 aa18.75■□□□□ 0.59
HLA-F-220ENST00000434407 ARHGAP12Q8IWW6 846 aa18.75■□□□□ 0.59
HLA-F-220ENST00000434407 PLPP6Q8IY26 295 aa18.75■□□□□ 0.59
HLA-F-220ENST00000434407 OR2A12Q8NGT7 310 aa18.75■□□□□ 0.59
HLA-F-220ENST00000434407 ISG20Q96AZ6 181 aaKnown RBP18.75■□□□□ 0.59
HLA-F-220ENST00000434407 PABPC3Q9H361 631 aaKnown RBP18.75■□□□□ 0.59
HLA-F-220ENST00000434407 GMEB2Q9UKD1 530 aa18.75■□□□□ 0.59
HLA-F-220ENST00000434407 PCDHGA5Q9Y5G8 931 aa18.75■□□□□ 0.59
HLA-F-220ENST00000434407 DMXL1Q9Y485 3027 aa18.74■□□□□ 0.59
HLA-F-220ENST00000434407 RCCD1A6NED2 376 aa18.74■□□□□ 0.59
HLA-F-220ENST00000434407 DAPK3O43293 454 aa18.74■□□□□ 0.59
HLA-F-220ENST00000434407 LRP3O75074 770 aa18.74■□□□□ 0.59
HLA-F-220ENST00000434407 KRT7P08729 469 aa18.74■□□□□ 0.59
HLA-F-220ENST00000434407 TGM1P22735 817 aa18.74■□□□□ 0.59
HLA-F-220ENST00000434407 SLC1A1P43005 524 aa18.74■□□□□ 0.59
HLA-F-220ENST00000434407 CDH6P55285 790 aa18.74■□□□□ 0.59
HLA-F-220ENST00000434407 GSDMDP57764 484 aa18.74■□□□□ 0.59
HLA-F-220ENST00000434407 CST6Q15828 149 aa18.74■□□□□ 0.59
HLA-F-220ENST00000434407 LPCAT2Q7L5N7 544 aa18.74■□□□□ 0.59
HLA-F-220ENST00000434407 MMAAQ8IVH4 418 aaKnown RBP18.74■□□□□ 0.59
HLA-F-220ENST00000434407 LZTR1Q8N653 840 aa18.74■□□□□ 0.59
HLA-F-220ENST00000434407 PCDH20Q8N6Y1 951 aaKnown RBP18.74■□□□□ 0.59
HLA-F-220ENST00000434407 NPWQ8N729 165 aa18.74■□□□□ 0.59
HLA-F-220ENST00000434407 OR8D1Q8WZ84 308 aa18.74■□□□□ 0.59
HLA-F-220ENST00000434407 FAM131CQ96AQ9 280 aa18.74■□□□□ 0.59
HLA-F-220ENST00000434407 PPM1HQ9ULR3 514 aa18.74■□□□□ 0.59
HLA-F-220ENST00000434407 ACTL7AQ9Y615 435 aa18.74■□□□□ 0.59
HLA-F-220ENST00000434407 SHROOM3Q8TF72 1996 aa18.73■□□□□ 0.59
HLA-F-220ENST00000434407 BTNL10A8MVZ5 291 aa18.73■□□□□ 0.59
HLA-F-220ENST00000434407 MID1O15344 667 aa18.73■□□□□ 0.59
HLA-F-220ENST00000434407 MAP3K13O43283 966 aa18.73■□□□□ 0.59
HLA-F-220ENST00000434407 ADH1BP00325 375 aa18.73■□□□□ 0.59
HLA-F-220ENST00000434407 DNTTP04053 509 aa18.73■□□□□ 0.59
HLA-F-220ENST00000434407 AMPD1P23109 780 aa18.73■□□□□ 0.59
HLA-F-220ENST00000434407 SSR1P43307 286 aaKnown RBP18.73■□□□□ 0.59
HLA-F-220ENST00000434407 DPYSL3Q14195 570 aa18.73■□□□□ 0.59
HLA-F-220ENST00000434407 PDK2Q15119 407 aa18.73■□□□□ 0.59
HLA-F-220ENST00000434407 TTC31Q49AM3 519 aaPredicted RBP18.73■□□□□ 0.59
HLA-F-220ENST00000434407 INO80DQ53TQ3 878 aaPredicted RBP18.73■□□□□ 0.59
HLA-F-220ENST00000434407 LRRC38Q5VT99 294 aa18.73■□□□□ 0.59
HLA-F-220ENST00000434407 CACUL1Q86Y37 369 aa18.73■□□□□ 0.59
HLA-F-220ENST00000434407 CASKIN2Q8WXE0 1202 aa18.73■□□□□ 0.59
HLA-F-220ENST00000434407 FAF2Q96CS3 445 aa18.73■□□□□ 0.59
HLA-F-220ENST00000434407 TOE1Q96GM8 510 aaKnown RBP18.73■□□□□ 0.59
HLA-F-220ENST00000434407 ZNF419Q96HQ0 510 aaPredicted RBP18.73■□□□□ 0.59
HLA-F-220ENST00000434407 SLC39A8Q9C0K1 460 aa18.73■□□□□ 0.59
HLA-F-220ENST00000434407 PDFQ9HBH1 243 aa18.73■□□□□ 0.59
HLA-F-220ENST00000434407 ETNK2Q9NVF9 386 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms