RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 NPC1O15118 1278 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 PRPSAP2O60256 369 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 NDUFS2O75306 463 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 RHOBTB1O94844 696 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 LRIG2O94898 1065 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZIC2O95409 532 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 DNTTP04053 509 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 ASLP04424 464 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 SRPRAP08240 638 aaKnown RBP5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 H2AFZP0C0S5 128 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 TNNT1P13805 278 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 TCF4P15884 667 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 EPHB2P29323 1055 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 MIPP30301 263 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 GJC1P36383 396 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 ACVRL1P37023 503 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 P2RY2P41231 377 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 DNA2P51530 1060 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 TPMTP51580 245 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 PLK1P53350 603 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 OXCT1P55809 520 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 RPS14P62263 151 aaKnown RBP5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 KRT83P78385 493 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 RPL6Q02878 288 aaKnown RBP5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 GNA12Q03113 381 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 SULT2A1Q06520 285 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 SLC12A1Q13621 1099 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 ENPP2Q13822 863 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 BYSLQ13895 437 aaKnown RBP5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 POLD3Q15054 466 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 E2F5Q15329 346 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 SLC18A3Q16572 532 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 ASTE1Q2TB18 679 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 POM121L1PQ3SYA9 428 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 ATP13A4Q4VNC1 1196 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 EFHC2Q5JST6 749 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 ARTNQ5T4W7 220 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 RNF43Q68DV7 783 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 H2AFVQ71UI9 128 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 SETD3Q86TU7 594 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 CPNE8Q86YQ8 564 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 CNGA4Q8IV77 575 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 MMAAQ8IVH4 418 aaKnown RBP5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 STK40Q8N2I9 435 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 TC2NQ8N9U0 490 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 ATP11CQ8NB49 1132 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 OR2T3Q8NH03 318 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 HSPH1Q92598 858 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 PIGKQ92643 395 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 PTPRN2Q92932 1015 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 NTAN1Q96AB6 310 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 TBC1D31Q96DN5 1066 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 MYO19Q96H55 970 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 PEBP4Q96S96 227 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 FAM129BQ96TA1 746 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 PSMB7Q99436 277 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 CD248Q9HCU0 757 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 ATP13A1Q9HD20 1204 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 OSGEPQ9NPF4 335 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 TMEM51Q9NW97 253 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 PPARGC1AQ9UBK2 798 aaKnown RBP5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 ANAPC7Q9UJX3 599 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 GMEB2Q9UKD1 530 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 USP18Q9UMW8 372 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 TFR2Q9UP52 801 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 AP4E1Q9UPM8 1137 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 OR51B4Q9Y5P0 310 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 NUP205Q92621 2012 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 MUC22E2RYF6 1773 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 ABCA7Q8IZY2 2146 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 NYNRINQ9P2P1 1898 aaKnown RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 IGHV1OR15-9A0A0B4J2B8 117 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 EDDM13A0A1B0GTR0 161 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 SSU72P8A0A1W2PR75 194 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 ILVBLA1L0T0 632 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 TARSL2A2RTX5 802 aaKnown RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 FAM47DPA6NHR8 397 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 PATE3B3GLJ2 98 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 MYO1FO00160 1098 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 EEF2KO00418 725 aaKnown RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 PLK4O00444 970 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 SMAD6O43541 496 aaKnown RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 BUB1O43683 1085 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 RNASEH1O60930 286 aaKnown RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZNF217O75362 1048 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 LRCH4O75427 683 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 RNASEH2AO75792 299 aaKnown RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 IL1BP01584 269 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 CYP1A2P05177 515 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 RARAP10276 462 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 SRCP12931 536 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 RHOQP17081 205 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 GOT1P17174 413 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 AMPD1P23109 780 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 IL1R2P27930 398 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 L1CAMP32004 1257 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 SLC8A1P32418 973 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 PTGER3P43115 390 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 MAGEA1P43355 309 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 PSMD8P48556 350 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms