RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 TACR2P21452 398 aa19.91■□□□□ 0.78
VRK2-205ENST00000432057 GEMP55040 296 aa19.91■□□□□ 0.78
VRK2-205ENST00000432057 THOC1Q96FV9 657 aaKnown RBP19.91■□□□□ 0.78
VRK2-205ENST00000432057 CEP295NLQ96MC4 621 aa19.91■□□□□ 0.78
VRK2-205ENST00000432057 HERC2P3Q9BVR0 1158 aa19.91■□□□□ 0.78
VRK2-205ENST00000432057 SLC13A1Q9BZW2 595 aa19.91■□□□□ 0.78
VRK2-205ENST00000432057 SP110Q9HB58 689 aa19.91■□□□□ 0.78
VRK2-205ENST00000432057 CYP4F11Q9HBI6 524 aa19.91■□□□□ 0.78
VRK2-205ENST00000432057 ABHD14A-ACY1A0A1B0GW23 586 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 CCDC78A2IDD5 438 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 PMPCBO75439 489 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 ABLIM3O94929 683 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 F7P08709 466 aaPredicted RBP19.9■□□□□ 0.78
VRK2-205ENST00000432057 CSF2RAP15509 400 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 HMGA1P17096 107 aaKnown RBP19.9■□□□□ 0.78
VRK2-205ENST00000432057 NMBRP28336 390 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 ATP5C1P36542 298 aaKnown RBP19.9■□□□□ 0.78
VRK2-205ENST00000432057 LIG3P49916 1009 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 KPNA1P52294 538 aaPredicted RBP19.9■□□□□ 0.78
VRK2-205ENST00000432057 DSG1Q02413 1049 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 TIFABQ6ZNK6 161 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 ZNF354CQ86Y25 554 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 NDUFAF2Q8N183 169 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 PDZD8Q8NEN9 1154 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 ZNF461Q8TAF7 563 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 PTPRN2Q92932 1015 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 GRAMD1AQ96CP6 724 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 KLHL5Q96PQ7 755 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 CDK5RAP1Q96SZ6 601 aaKnown RBP19.9■□□□□ 0.78
VRK2-205ENST00000432057 NACA2Q9H009 215 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 VPS11Q9H270 941 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 NT5MQ9NPB1 228 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 ABCF3Q9NUQ8 709 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 PRKAG3Q9UGI9 489 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 DNMT3LQ9UJW3 386 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 ARL2BPQ9Y2Y0 163 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 STARD13Q9Y3M8 1113 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 YIPF1Q9Y548 306 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 TOP3BO95985 862 aaKnown RBP19.9■□□□□ 0.78
VRK2-205ENST00000432057 ITGA2BP08514 1039 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 PLD1Q13393 1074 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 BTG3Q14201 252 aaPredicted RBP19.9■□□□□ 0.78
VRK2-205ENST00000432057 FRG1Q14331 258 aaKnown RBP19.9■□□□□ 0.78
VRK2-205ENST00000432057 DENND5AQ6IQ26 1287 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 ZNF449Q6P9G9 518 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 FBXO46Q6PJ61 603 aaPredicted RBP19.9■□□□□ 0.78
VRK2-205ENST00000432057 C10orf67Q8IYJ2 551 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 LGI2Q8N0V4 545 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 CCDC63Q8NA47 563 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 OVCA2Q8WZ82 227 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 PSMG2Q969U7 264 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 PABPC5Q96DU9 382 aaKnown RBP19.9■□□□□ 0.78
VRK2-205ENST00000432057 PAWRQ96IZ0 340 aaKnown RBP19.9■□□□□ 0.78
VRK2-205ENST00000432057 PLLPQ9Y342 182 aa19.9■□□□□ 0.78
VRK2-205ENST00000432057 DENND4CQ5VZ89 1909 aa19.89■□□□□ 0.78
VRK2-205ENST00000432057 ZNF840PA6NDX5 716 aa19.89■□□□□ 0.77
VRK2-205ENST00000432057 AP3B1O00203 1094 aa19.89■□□□□ 0.77
VRK2-205ENST00000432057 TPP1O14773 563 aa19.89■□□□□ 0.77
VRK2-205ENST00000432057 ALDOAP04075 364 aaKnown RBP19.89■□□□□ 0.77
VRK2-205ENST00000432057 SLC6A4P31645 630 aa19.89■□□□□ 0.77
VRK2-205ENST00000432057 ADRA1AP35348 466 aa19.89■□□□□ 0.77
VRK2-205ENST00000432057 GP5P40197 560 aa19.89■□□□□ 0.77
VRK2-205ENST00000432057 SERPINB4P48594 390 aa19.89■□□□□ 0.77
VRK2-205ENST00000432057 WDR5P61964 334 aaKnown RBP19.89■□□□□ 0.77
VRK2-205ENST00000432057 SLC10A7Q0GE19 358 aa19.89■□□□□ 0.77
VRK2-205ENST00000432057 OTOAQ7RTW8 1153 aa19.89■□□□□ 0.77
VRK2-205ENST00000432057 AUTS2Q8WXX7 1259 aa19.89■□□□□ 0.77
VRK2-205ENST00000432057 ZNF778Q96MU6 729 aa19.89■□□□□ 0.77
VRK2-205ENST00000432057 AGAP2Q99490 1192 aa19.89■□□□□ 0.77
VRK2-205ENST00000432057 CPNE1Q99829 537 aa19.89■□□□□ 0.77
VRK2-205ENST00000432057 C11orf49Q9H6J7 331 aa19.89■□□□□ 0.77
VRK2-205ENST00000432057 DONSONQ9NYP3 566 aa19.89■□□□□ 0.77
VRK2-205ENST00000432057 TXNDC16Q9P2K2 825 aa19.89■□□□□ 0.77
VRK2-205ENST00000432057 GGT7Q9UJ14 662 aa19.89■□□□□ 0.77
VRK2-205ENST00000432057 MAGEB16A2A368 324 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 TRIM43BA6NCK2 446 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 F5H5T6 163 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 COCHO43405 550 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 RAMP2O60895 175 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 HSPA8P11142 646 aaKnown RBP19.88■□□□□ 0.77
VRK2-205ENST00000432057 NUMBP49757 651 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 MAXP61244 160 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 HNRNPDQ14103 355 aaKnown RBP19.88■□□□□ 0.77
VRK2-205ENST00000432057 POU6F1Q14863 301 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 POLD3Q15054 466 aaPredicted RBP19.88■□□□□ 0.77
VRK2-205ENST00000432057 HSP90AA5PQ58FG0 334 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 FAM133BQ5BKY9 247 aaKnown RBP19.88■□□□□ 0.77
VRK2-205ENST00000432057 HECTD3Q5T447 861 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 SNX30Q5VWJ9 437 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 RFWD3Q6PCD5 774 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 TRPM8Q7Z2W7 1104 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 KCNMB4Q86W47 210 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 CFAP52Q8N1V2 620 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 FATE1Q969F0 183 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 TRIM43Q96BQ3 446 aaPredicted RBP19.88■□□□□ 0.77
VRK2-205ENST00000432057 MRGPRX2Q96LB1 330 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 PPP1R2P1Q96PQ5 205 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 FSD1LQ9BXM9 530 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 KDM4CQ9H3R0 1056 aa19.88■□□□□ 0.77
VRK2-205ENST00000432057 MANSC1Q9H8J5 431 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms