RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 DFFAO00273 331 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 CEP290O15078 2479 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 EFEMP2O95967 443 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 BPGMP07738 259 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 ITGA2BP08514 1039 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 TUBP50607 506 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 GEMP55040 296 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 TMPRSS15P98073 1019 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 ELAVL2Q12926 359 aaKnown RBP13.07□□□□□ -0.32
DDX56-204ENST00000431640 MRPL58Q14197 206 aaKnown RBP13.07□□□□□ -0.32
DDX56-204ENST00000431640 SNCBQ16143 134 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 ANO4Q32M45 955 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 CTXN3Q4LDR2 81 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 ANKRD20A4Q4UJ75 823 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 VARS2Q5ST30 1063 aaKnown RBP13.07□□□□□ -0.32
DDX56-204ENST00000431640 ZNF280DQ6N043 979 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 HERC6Q8IVU3 1022 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 MAGEC3Q8TD91 643 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 ERP27Q96DN0 273 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 THOC1Q96FV9 657 aaKnown RBP13.07□□□□□ -0.32
DDX56-204ENST00000431640 GDF15Q99988 308 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 GORASP1Q9BQQ3 440 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 TRIM56Q9BRZ2 755 aaKnown RBP13.07□□□□□ -0.32
DDX56-204ENST00000431640 MLPHQ9BV36 600 aaPredicted RBP13.07□□□□□ -0.32
DDX56-204ENST00000431640 PLXNA4Q9HCM2 1894 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 CLIC5Q9NZA1 410 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 ZFP69BQ9UJL9 534 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 SOX13Q9UN79 622 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 MYO18AQ92614 2054 aaKnown RBP13.07□□□□□ -0.32
DDX56-204ENST00000431640 GRXCR1A8MXD5 290 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 E9PAM4 449 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 H7C4K7 107 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 DNAJC6O75061 913 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 MPOP05164 745 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 GALTP07902 379 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 TYK2P29597 1187 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 CSE1LP55060 971 aaKnown RBP13.07□□□□□ -0.32
DDX56-204ENST00000431640 STX3Q13277 289 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 PCID2Q5JVF3 399 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 AFMIDQ63HM1 303 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 CRLF3Q8IUI8 442 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 ARHGAP12Q8IWW6 846 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 CMTR2Q8IYT2 770 aaKnown RBP13.07□□□□□ -0.32
DDX56-204ENST00000431640 RTL3Q8N8U3 475 aaKnown RBP13.07□□□□□ -0.32
DDX56-204ENST00000431640 ATP6V0D2Q8N8Y2 350 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 FATE1Q969F0 183 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 ZNF669Q96BR6 464 aaPredicted RBP13.07□□□□□ -0.32
DDX56-204ENST00000431640 SLC39A13Q96H72 371 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 CELF6Q96J87 481 aaKnown RBP13.07□□□□□ -0.32
DDX56-204ENST00000431640 FCRL3Q96P31 734 aaPredicted RBP13.07□□□□□ -0.32
DDX56-204ENST00000431640 TMEM237Q96Q45 408 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 LBHD1Q9BQE6 289 aaPredicted RBP13.07□□□□□ -0.32
DDX56-204ENST00000431640 SIKE1Q9BRV8 207 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 MRPL9Q9BYD2 267 aaKnown RBP13.07□□□□□ -0.32
DDX56-204ENST00000431640 SLC39A8Q9C0K1 460 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 NMUR1Q9HB89 426 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 GLOD4Q9HC38 313 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 KCNK4Q9NYG8 393 aa13.07□□□□□ -0.32
DDX56-204ENST00000431640 ZCWPW2A0A1B0GU75 182 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 FAM92AA1XBS5 289 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 TPP1O14773 563 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 TIMM44O43615 452 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 MAFKO60675 156 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 NEBLO76041 1014 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 DLDP09622 509 aaKnown RBP13.06□□□□□ -0.32
DDX56-204ENST00000431640 OR4Q2P0C623 313 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 ERVK-10P10266 1014 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 MYOGP15173 224 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 YWHAQP27348 245 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 NDST2P52849 883 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 TBX4P57082 545 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 OVGP1Q12889 678 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 CHI3L2Q15782 390 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 CCDC153Q494R4 210 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 TEDDM1Q5T9Z0 273 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 FAM171A1Q5VUB5 890 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 PDPK2PQ6A1A2 396 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 UNC5BQ8IZJ1 945 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 CNTD1Q8N815 330 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 SPPL2BQ8TCT7 592 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 SP7Q8TDD2 431 aaPredicted RBP13.06□□□□□ -0.32
DDX56-204ENST00000431640 C2orf15Q8WU43 125 aaKnown RBP13.06□□□□□ -0.32
DDX56-204ENST00000431640 PTCD2Q8WV60 388 aaKnown RBP13.06□□□□□ -0.32
DDX56-204ENST00000431640 ISL2Q96A47 359 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 B3GALT6Q96L58 329 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 YME1L1Q96TA2 773 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 RBBP8Q99708 897 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 KIFC1Q9BW19 673 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 GPR62Q9BZJ7 368 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 ENTPD7Q9NQZ7 604 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 THAP1Q9NVV9 213 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 PIH1D1Q9NWS0 290 aaKnown RBP13.06□□□□□ -0.32
DDX56-204ENST00000431640 PPARGC1AQ9UBK2 798 aaKnown RBP13.06□□□□□ -0.32
DDX56-204ENST00000431640 DCTN4Q9UJW0 460 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 NEU3Q9UQ49 428 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 HS3ST4Q9Y661 456 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 SLC4A7Q9Y6M7 1214 aa13.06□□□□□ -0.32
DDX56-204ENST00000431640 A0A0G2JND7 137 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 TRAFD1O14545 582 aaPredicted RBP13.05□□□□□ -0.32
DDX56-204ENST00000431640 CHUKO15111 745 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms