RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 AGAP11Q8TF27 550 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 ATP2A3Q93084 1043 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 SORT1Q99523 831 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 NMUR2Q9GZQ4 415 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 FBXO44Q9H4M3 255 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 MRM3Q9HC36 420 aaKnown RBP14.2□□□□□ -0.14
HOXC4-202ENST00000430889 MARCH5Q9NX47 278 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 GMIPQ9P107 970 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 COPG2Q9UBF2 871 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 ZNF212Q9UDV6 495 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 PRG3Q9Y2Y8 225 aaPredicted RBP14.2□□□□□ -0.14
HOXC4-202ENST00000430889 PCDHB5Q9Y5E4 795 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 TET1Q8NFU7 2136 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 SIN3BO75182 1162 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 ANXA9O76027 345 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 MT-CYBP00156 380 aaPredicted RBP14.2□□□□□ -0.14
HOXC4-202ENST00000430889 SERPINE1P05121 402 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 MPOP05164 745 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 FGFR3P22607 806 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 TYK2P29597 1187 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 ARRB2P32121 409 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 TNK2Q07912 1038 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 MPP3Q13368 585 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 TUBB3Q13509 450 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 DDR2Q16832 855 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 PREPLQ4J6C6 727 aaPredicted RBP14.2□□□□□ -0.14
HOXC4-202ENST00000430889 PCID2Q5JVF3 399 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 TIGD7Q6NT04 549 aaPredicted RBP14.2□□□□□ -0.14
HOXC4-202ENST00000430889 PKN3Q6P5Z2 889 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 ALYREFQ86V81 257 aaKnown RBP14.2□□□□□ -0.14
HOXC4-202ENST00000430889 CRLF3Q8IUI8 442 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 CRIPAKQ8N1N5 446 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 PLD6Q8N2A8 252 aaKnown RBP14.2□□□□□ -0.14
HOXC4-202ENST00000430889 ARHGAP18Q8N392 663 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 FAM13CQ8NE31 585 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 ACVR1CQ8NER5 493 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 NSL1Q96IY1 281 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 CASD1Q96PB1 797 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 PPP1R2P1Q96PQ5 205 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 GPR22Q99680 433 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 SIKE1Q9BRV8 207 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 TXNDC16Q9P2K2 825 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 PPARGC1AQ9UBK2 798 aaKnown RBP14.2□□□□□ -0.14
HOXC4-202ENST00000430889 RPL26L1Q9UNX3 145 aaKnown RBP14.2□□□□□ -0.14
HOXC4-202ENST00000430889 STK38LQ9Y2H1 464 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 TANC1Q9C0D5 1861 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 OR6C75A6NL08 312 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 ARVCFO00192 962 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 TIMM44O43615 452 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 NBNO60934 754 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 IGLV3-27P01718 113 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 F7P08709 466 aaPredicted RBP14.19□□□□□ -0.14
HOXC4-202ENST00000430889 SLC2A3P11169 496 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 ALOX15P16050 662 aaPredicted RBP14.19□□□□□ -0.14
HOXC4-202ENST00000430889 ARNTP27540 789 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 HOXD10P28358 340 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 GRK4P32298 578 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 ARCN1P48444 511 aaKnown RBP14.19□□□□□ -0.14
HOXC4-202ENST00000430889 HARS2P49590 506 aaKnown RBP14.19□□□□□ -0.14
HOXC4-202ENST00000430889 PAPOLAP51003 745 aaKnown RBP14.19□□□□□ -0.14
HOXC4-202ENST00000430889 GEMP55040 296 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 CCDC153Q494R4 210 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 ARMC3Q5W041 872 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 PDPK2PQ6A1A2 396 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 KDELC1Q6UW63 502 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 RANBP10Q6VN20 620 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 LRRC8DQ7L1W4 858 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 ZC3HC1Q86WB0 502 aaKnown RBP14.19□□□□□ -0.14
HOXC4-202ENST00000430889 C10orf107Q8IVU9 208 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 REM2Q8IYK8 340 aaPredicted RBP14.19□□□□□ -0.14
HOXC4-202ENST00000430889 PTCD2Q8WV60 388 aaKnown RBP14.19□□□□□ -0.14
HOXC4-202ENST00000430889 VPS39Q96JC1 886 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 MRGPRX2Q96LB1 330 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 C1QTNF1Q9BXJ1 281 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 GPR62Q9BZJ7 368 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.19□□□□□ -0.14
HOXC4-202ENST00000430889 WWP1Q9H0M0 922 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 ATP13A1Q9HD20 1204 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 C20orf96Q9NUD7 363 aaPredicted RBP14.19□□□□□ -0.14
HOXC4-202ENST00000430889 ZNF358Q9NW07 568 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 NSMCE4AQ9NXX6 385 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 CLIC5Q9NZA1 410 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 MPP6Q9NZW5 540 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 PHF24Q9UPV7 400 aa14.19□□□□□ -0.14
HOXC4-202ENST00000430889 G3V2L1 256 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 ZNF195O14628 629 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 ENPP3O14638 875 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 LYPLA1O75608 230 aaPredicted RBP14.18□□□□□ -0.14
HOXC4-202ENST00000430889 SELPP16109 830 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 RHOQP17081 205 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 CALB2P22676 271 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 GRK2P25098 689 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 GABRB3P28472 473 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 HADHAP40939 763 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 CDK7P50613 346 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 NDST2P52849 883 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 TBX4P57082 545 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 IRX4P78413 519 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 MS4A13Q5J8X5 152 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 CCDC91Q7Z6B0 441 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms