RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 MIR1-1HGQ9H1L0 117 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 MAGEH1Q9H213 219 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 C6orf106Q9H6K1 298 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-207ENST00000430858 CATSPERBQ9H7T0 1116 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 DONSONQ9NYP3 566 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 MYO1AQ9UBC5 1043 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 SERGEFQ9UGK8 458 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 DNAI1Q9UI46 699 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 PPM1HQ9ULR3 514 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 TPX2Q9ULW0 747 aaKnown RBP10.04□□□□□ -0.8
HDAC6-207ENST00000430858 HPCAL4Q9UM19 191 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-207ENST00000430858 LRRC72A6NJI9 287 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 WASH4PA8MWX3 477 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 K7ERQ8 282 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 ARHGAP33O14559 1287 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 BCAT2O15382 392 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-207ENST00000430858 FGF10O15520 208 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-207ENST00000430858 SLC7A4O43246 635 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 CREB3O43889 395 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 BNIP3LO60238 219 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 GLDCP23378 1020 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 HNRNPH3P31942 346 aaKnown RBP10.03□□□□□ -0.8
HDAC6-207ENST00000430858 MAPK8P45983 427 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 RECQLP46063 649 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-207ENST00000430858 SERPINH1P50454 418 aaKnown RBP10.03□□□□□ -0.8
HDAC6-207ENST00000430858 GALCP54803 685 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 GEMIN4P57678 1058 aaKnown RBP10.03□□□□□ -0.8
HDAC6-207ENST00000430858 ARF5P84085 180 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 ZNF252P-AS1Q0IIN9 211 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 SEMA3BQ13214 749 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 POLD3Q15054 466 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-207ENST00000430858 ERMARDQ5T6L9 678 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 KIAA0895LQ68EN5 471 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 C22orf39Q6P5X5 142 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 ALKBH5Q6P6C2 394 aaKnown RBP10.03□□□□□ -0.8
HDAC6-207ENST00000430858 PSTKQ8IV42 348 aaKnown RBP10.03□□□□□ -0.8
HDAC6-207ENST00000430858 AADATQ8N5Z0 425 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 PCDH20Q8N6Y1 951 aaKnown RBP10.03□□□□□ -0.8
HDAC6-207ENST00000430858 RNF214Q8ND24 703 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 OR8K1Q8NGG5 319 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 OR2A12Q8NGT7 310 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 OR2T34Q8NGX1 318 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 PIP4K2CQ8TBX8 421 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 SNX19Q92543 992 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 NUP205Q92621 2012 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 FAM131CQ96AQ9 280 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 BIRC7Q96CA5 298 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 TRIM7Q9C029 511 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 ZDHHC5Q9C0B5 715 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 KDM4CQ9H3R0 1056 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 OSGEPQ9NPF4 335 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 NDFIP2Q9NV92 336 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 EIF2B4Q9UI10 523 aaKnown RBP10.03□□□□□ -0.8
HDAC6-207ENST00000430858 ZNF292O60281 2723 aa10.03□□□□□ -0.8
HDAC6-207ENST00000430858 DCHS1Q96JQ0 3298 aa10.02□□□□□ -0.8
HDAC6-207ENST00000430858 CEP250Q9BV73 2442 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 A0A087X0T9 212 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 ZSCAN5CA6NGD5 496 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-207ENST00000430858 FAM47DPA6NHR8 397 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 SMAD6O43541 496 aaKnown RBP10.02□□□□□ -0.81
HDAC6-207ENST00000430858 KDELR3O43731 214 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 PRPSAP2O60256 369 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 LRCH4O75427 683 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 FSBPO95073 299 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 PRNPP04156 253 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 IGHV4-34P06331 123 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 TPM1P09493 284 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 FAM228BP0C875 321 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 CD27P26842 260 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 MIPP30301 263 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 CHRNA3P32297 505 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 DRD3P35462 400 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 PCK1P35558 622 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 ACVRL1P37023 503 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 ZNF135P52742 658 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-207ENST00000430858 ADPRHP54922 357 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 YBEYP58557 167 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-207ENST00000430858 TPI1P60174 286 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 CCDC15Q0P6D6 951 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 PIGHQ14442 188 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-207ENST00000430858 TEAD4Q15561 434 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 TSR1Q2NL82 804 aaKnown RBP10.02□□□□□ -0.81
HDAC6-207ENST00000430858 NCEH1Q6PIU2 408 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-207ENST00000430858 VSTM4Q8IW00 320 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 PLPP6Q8IY26 295 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 ZCCHC9Q8N567 271 aaKnown RBP10.02□□□□□ -0.81
HDAC6-207ENST00000430858 ARFGAP1Q8N6T3 406 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 TMIEQ8NEW7 156 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 OR14C36Q8NHC7 312 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 C1orf216Q8TAB5 229 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 ISG20Q96AZ6 181 aaKnown RBP10.02□□□□□ -0.81
HDAC6-207ENST00000430858 SNRNP25Q9BV90 132 aaKnown RBP10.02□□□□□ -0.81
HDAC6-207ENST00000430858 GTPBP2Q9BX10 602 aaKnown RBP10.02□□□□□ -0.81
HDAC6-207ENST00000430858 THAP2Q9H0W7 228 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 DHX35Q9H5Z1 703 aaKnown RBP10.02□□□□□ -0.81
HDAC6-207ENST00000430858 FSCN3Q9NQT6 498 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 ZNHIT6Q9NWK9 470 aaKnown RBP10.02□□□□□ -0.81
HDAC6-207ENST00000430858 ARHGAP20Q9P2F6 1191 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms