RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 DLG4P78352 724 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 SHBQ15464 509 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 PITRM1Q5JRX3 1037 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 LCE3BQ5TA77 95 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 PIK3R6Q5UE93 754 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 BSPRYQ5W0U4 402 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 CNNM4Q6P4Q7 775 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 ZNF574Q6ZN55 896 aaPredicted RBP8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 RBM44Q6ZP01 1051 aaKnown RBP8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 FAM186BQ8IYM0 893 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 ANKRD52Q8NB46 1076 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 RBBP8NLQ8NC74 664 aaPredicted RBP8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 FIBINQ8TAL6 211 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 IFI44Q8TCB0 444 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 HIC2Q96JB3 615 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 USP28Q96RU2 1077 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 ORAI3Q9BRQ5 295 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 SRRTQ9BXP5 876 aaKnown RBP8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 UBXN6Q9BZV1 441 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 CISHQ9NSE2 258 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 DNAJC28Q9NX36 388 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 NLGN3Q9NZ94 848 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 SEPT10Q9P0V9 454 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 SLC12A6Q9UHW9 1150 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 CYTH4Q9UIA0 394 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 SATB2Q9UPW6 733 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 A0A1B0GVM2 712 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 ESPNB1AK53 854 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 F5H5T6 163 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 K7ENP7 123 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 TRIM38O00635 465 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 PDXKO00764 312 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 SLC31A1O15431 190 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 SART1O43290 800 aaKnown RBP8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 LATO43561 262 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 RTN2O75298 545 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 LUC7L3O95232 432 aaKnown RBP8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 DGKAP23743 735 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 NR2F2P24468 414 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 RECQLP46063 649 aaPredicted RBP8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 ME1P48163 572 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 KCNJ12Q14500 433 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 RABGAP1LQ5R372 815 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 C9orf64Q5T6V5 341 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 TCERG1LQ5VWI1 586 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 KRT39Q6A163 491 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 FAM173BQ6P4H8 233 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 INO80CQ6PI98 192 aaPredicted RBP8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 PCSK4Q6UW60 755 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 XKR5Q6UX68 686 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 TRIM69Q86WT6 500 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 SLC9A9Q8IVB4 645 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 AADATQ8N5Z0 425 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 FBXL13Q8NEE6 735 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 WDR36Q8NI36 951 aaKnown RBP8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 WDR48Q8TAF3 677 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 PLEKHO2Q8TD55 490 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 TAS1R2Q8TE23 839 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 TTC17Q96AE7 1141 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 FAM149B1Q96BN6 582 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 PPP1R16AQ96I34 528 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 RPL10LQ96L21 214 aaKnown RBP8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 CCNL2Q96S94 520 aaPredicted RBP8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 IL12RB2Q99665 862 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 SEMA4CQ9C0C4 833 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 STRADBQ9C0K7 418 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 TMEM8AQ9HCN3 771 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 PREBQ9HCU5 417 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 CNGB3Q9NQW8 809 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 KLHL11Q9NVR0 708 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 TSPAN16Q9UKR8 245 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 PCDHGA11Q9Y5H2 935 aa8.08□□□□□ -1.12
ECHDC1-207ENST00000430841 ITIH6Q6UXX5 1313 aa8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 A6NNZ2 444 aa8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 KPNA3O00505 521 aaPredicted RBP8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 PLRG1O43660 514 aaKnown RBP8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 PPP6R2O75170 966 aa8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 PPFIA2O75334 1257 aa8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 FBXO21O94952 628 aa8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 PCDH8O95206 1070 aa8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 LTFP02788 710 aa8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 EPB41P11171 864 aaKnown RBP8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 PRLRP16471 622 aa8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 HNRNPA2B1P22626 353 aaKnown RBP8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 DEKP35659 375 aaKnown RBP8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 PSMC2P35998 433 aaKnown RBP8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 SGSHP51688 502 aa8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 RPS24P62847 133 aaKnown RBP8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 ZNF177Q13360 481 aaPredicted RBP8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 SLC12A1Q13621 1099 aa8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 SPIDRQ14159 915 aa8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 NR0B2Q15466 257 aa8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 ISXQ2M1V0 245 aa8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 DCAF17Q5H9S7 520 aaPredicted RBP8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 RAB41Q5JT25 222 aa8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 TTC39BQ5VTQ0 682 aaPredicted RBP8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 ARHGAP17Q68EM7 881 aa8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 PM20D1Q6GTS8 502 aa8.07□□□□□ -1.12
ECHDC1-207ENST00000430841 ZCCHC8Q6NZY4 707 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms