RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 ARMC8Q8IUR7 673 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 SRFBP1Q8NEF9 429 aaKnown RBP3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 METTL6Q8TCB7 284 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 SLC2A12Q8TD20 617 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 BCAS4Q8TDM0 211 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 DENND1AQ8TEH3 1009 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 RPL36ALQ969Q0 106 aaKnown RBP3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 ZNF845Q96IR2 970 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 SH2D3AQ9BRG2 576 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 MXD3Q9BW11 206 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 ERVK-5Q9HDB9 667 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 PCDHB16Q9NRJ7 776 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 LIN7CQ9NUP9 197 aaKnown RBP3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 KLHL13Q9P2N7 655 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 NFKBIL1Q9UBC1 381 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 GIMAP2Q9UG22 337 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 BTBD3Q9Y2F9 522 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 TTLL3Q9Y4R7 772 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 HEMK1Q9Y5R4 338 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 MAGED1Q9Y5V3 778 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 PSAT1Q9Y617 370 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 hCG_1807616A0A1W2PRN6 198 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 C3orf70A6NLC5 250 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 KCNU1A8MYU2 1149 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 PRYO14603 147 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 TNPO2O14787 897 aaKnown RBP3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 NKX2-8O15522 239 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 TNFSF14O43557 240 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 TSPAN3O60637 253 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 LARGE1O95461 756 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 PLAUP00749 431 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 CHN1P15882 459 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 PTMSP20962 102 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 CHMP24386 653 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 TM4SF1P30408 202 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 ACSL1P33121 698 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 MMP13P45452 471 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 PLCD1P51178 756 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 FOXL2P58012 376 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 NLRP5P59047 1200 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 RPL15P61313 204 aaKnown RBP3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 RPS13P62277 151 aaKnown RBP3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 PSMC6P62333 389 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 RPP30P78346 268 aaKnown RBP3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 ID2Q02363 134 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 CFHR1Q03591 330 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 DCTN2Q13561 401 aaKnown RBP3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 CUL4AQ13619 759 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 SEC23BQ15437 767 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 NFIL3Q16649 462 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 AAK1Q2M2I8 961 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 SLC9C1Q4G0N8 1177 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 CBWD5Q5RIA9 395 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 PXDC1Q5TGL8 231 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 LIPMQ5VYY2 423 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 RUSC1-AS1Q66K80 236 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 C11orf87Q6NUJ2 197 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 WDR93Q6P2C0 686 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 TMCO3Q6UWJ1 677 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 KYAT3Q6YP21 454 aaKnown RBP3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZNF517Q6ZMY9 492 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 DEF8Q6ZN54 512 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 LRRC8DQ7L1W4 858 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 SZRD1Q7Z422 152 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 DIS3L2Q8IYB7 885 aaKnown RBP3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 LAS2Q8IYD9 372 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 USP38Q8NB14 1042 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 ADPRHL1Q8NDY3 354 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 RUFY2Q8WXA3 655 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 PIGKQ92643 395 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 NSUN4Q96CB9 384 aaKnown RBP3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 TRMT61AQ96FX7 289 aaKnown RBP3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 REXO5Q96IC2 774 aaKnown RBP3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 FCRL5Q96RD9 977 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 CLSTN3Q9BQT9 956 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 CLPBQ9H078 707 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 SH3GLB2Q9NR46 395 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 SEPT11Q9NVA2 429 aaKnown RBP3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 ASNSD1Q9NWL6 643 aa3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 TUBA8Q9NY65 449 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 TDRD9Q8NDG6 1382 aaKnown RBP3.21□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZNF521Q96K83 1311 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 KDM3AQ9Y4C1 1321 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 TSPY2A6NKD2 308 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 B4DLN1 442 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 GRM8O00222 908 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 AP3D1O14617 1153 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 KAT7O95251 611 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 STARD3NLO95772 234 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 SCGB1D1O95968 90 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 ALDOAP04075 364 aaKnown RBP3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 ENO1P06733 434 aaKnown RBP3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 TSPY3P0CV98 308 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 TSPY8P0CW00 308 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 ACADMP11310 421 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 LAMP2P13473 410 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 AKR1A1P14550 325 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 ALOX12P18054 663 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 TFEBP19484 476 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms