RNA–Protein interactions for RNA: ENST00000428895.1

BX088651.4-202, humanhuman

TSL 1 (best) BASIC

Gene BX088651.4, Length 1,479 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BX088651.4-202ENST00000428895 CCDC66A2RUB6 948 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 TTC34A8MYJ7 566 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 CTNNA2P26232 953 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 DNA2P51530 1060 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 ACCSLQ4AC99 568 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 KIAA1211LQ6NV74 962 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 LEKR1Q6ZMV7 388 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 ARHGAP12Q8IWW6 846 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 REXO1L1PQ8IX06 675 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 TP53INP2Q8IXH6 220 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 LZTR1Q8N653 840 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 ATP11CQ8NB49 1132 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 FAF2Q96CS3 445 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 ALS2CR12Q96Q35 445 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 GABRG3Q99928 467 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 TMEM245Q9H330 911 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 MTG2Q9H4K7 406 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 ZSCAN32Q9NX65 697 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 ANKRD36A6QL64 1941 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 OTOGLQ3ZCN5 2332 aa13.18□□□□□ -0.3
BX088651.4-202ENST00000428895 A0A1W2PQF6 199 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 ARHGAP42A6NI28 874 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 K7ERQ8 282 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 KDELR3O43731 214 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 SYNCRIPO60506 623 aaKnown RBP13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 ZMPSTE24O75844 475 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 MAP3K6O95382 1288 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 SRCP12931 536 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 KRT10P13645 584 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 SERPINB6P35237 376 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 CDKN2BP42772 138 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 PAPOLAP51003 745 aaKnown RBP13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 DGKEP52429 567 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 RWDD2BP57060 319 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 ARF5P84085 180 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 SERINC3Q13530 473 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 ENPP2Q13822 863 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 STARD3Q14849 445 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 KAZNQ674X7 775 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 NCBP2-AS2Q69YL0 99 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 RETSATQ6NUM9 610 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 SPOCD1Q6ZMY3 1216 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 RFX6Q8HWS3 928 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 RCOR2Q8IZ40 523 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 SH2D3CQ8N5H7 860 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 PQLC3Q8N755 202 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 EXD1Q8NHP7 514 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 RBM41Q96IZ5 413 aaKnown RBP13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 ACTL7AQ9Y615 435 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 FRYLO94915 3013 aa13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 EP300Q09472 2414 aaPredicted RBP13.17□□□□□ -0.3
BX088651.4-202ENST00000428895 TCRBV21S2A2A0A5A6 115 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 MIF4GDA9UHW6 222 aaKnown RBP13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 ZNF487B1APH4 448 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 K7ESF4 209 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 SMAD6O43541 496 aaKnown RBP13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 MFSD11O43934 449 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 VAV1P15498 845 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 HOXA6P31267 233 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 PXNP49023 591 aaPredicted RBP13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 PEX5P50542 639 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 DYNLT1P63172 113 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 PAFAH1B3Q15102 231 aaKnown RBP13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 DLG2Q15700 870 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 AFMIDQ63HM1 303 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 ARHGAP36Q6ZRI8 547 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 VSIG1Q86XK7 387 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 UBL4BQ8N7F7 174 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 KDM1BQ8NB78 822 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 SUMF1Q8NBK3 374 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 TSTD1Q8NFU3 115 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 TRIM58Q8NG06 486 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 ALG3Q92685 438 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 POLMQ9NP87 494 aaPredicted RBP13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 SUN2Q9UH99 717 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 HS3ST2Q9Y278 367 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 CFAP54Q96N23 3096 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 SPTBN4Q9H254 2564 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 CEP192Q8TEP8 1941 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 USP27XA6NNY8 438 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 J3KR12 359 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 APOL1O14791 398 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 DDX3YO15523 660 aaKnown RBP13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 ATP9BO43861 1147 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 BNIP3LO60238 219 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 SIN3BO75182 1162 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 SERPINH1P50454 418 aaKnown RBP13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 GBE1Q04446 702 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 SLC20A2Q08357 652 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 HNRNPA1L2Q32P51 320 aaKnown RBP13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 TFDP3Q5H9I0 405 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 HEATR6Q6AI08 1181 aaKnown RBP13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 ANO7Q6IWH7 933 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 PGBD3Q8N328 593 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 FRS2Q8WU20 508 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 HMGB4Q8WW32 186 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 PTPRN2Q92932 1015 aa13.16□□□□□ -0.3
BX088651.4-202ENST00000428895 HES6Q96HZ4 224 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms