RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 IMPACTQ9P2X3 320 aa11.17□□□□□ -0.62
APOBEC3C-202ENST00000428892 SUN2Q9UH99 717 aa11.17□□□□□ -0.62
APOBEC3C-202ENST00000428892 XPO7Q9UIA9 1087 aaKnown RBP11.17□□□□□ -0.62
APOBEC3C-202ENST00000428892 GGA2Q9UJY4 613 aa11.17□□□□□ -0.62
APOBEC3C-202ENST00000428892 PCDHGA1Q9Y5H4 931 aa11.17□□□□□ -0.62
APOBEC3C-202ENST00000428892 A0A1B0GTQ1 180 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 TCRBV5S1A1TA0A578 114 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 FAM170AA1A519 330 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 RCCD1A6NED2 376 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 LRRC72A6NJI9 287 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 ESPNB1AK53 854 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 I6L893 689 aaPredicted RBP11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 YKT6O15498 198 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 PABPC1P11940 636 aaKnown RBP11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 ITPKBP27987 946 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 HLA-FP30511 346 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 EIF2S3P41091 472 aaKnown RBP11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 ARRB1P49407 418 aaPredicted RBP11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 GSDMDP57764 484 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 RPS14P62263 151 aaKnown RBP11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 DNAJC3Q13217 504 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 SLC25A52Q3SY17 297 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 SLC45A4Q5BKX6 768 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 ARTNQ5T4W7 220 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 MBLAC2Q68D91 279 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 RFWD3Q6PCD5 774 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 KIAA0907Q7Z7F0 614 aaPredicted RBP11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 CCDC117Q8IWD4 279 aaPredicted RBP11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 EID2Q8N6I1 236 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 MSANTD4Q8NCY6 345 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 TMA16Q96EY4 203 aaKnown RBP11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 LMLNQ96KR4 655 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 BTN2A3PQ96KV6 586 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 SLC6A18Q96N87 628 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 ELF4Q99607 663 aaPredicted RBP11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 OMDQ99983 421 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 C11orf70Q9BRQ4 267 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 XPO4Q9C0E2 1151 aaKnown RBP11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 NUCKS1Q9H1E3 243 aaKnown RBP11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 TMEM245Q9H330 911 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 FAM204AQ9H8W3 233 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 ANLNQ9NQW6 1124 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 GDF3Q9NR23 364 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 PIGVQ9NUD9 493 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 DDIT4Q9NX09 232 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 SCML1Q9UN30 329 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 KNTC1P50748 2209 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 DOCK4Q8N1I0 1966 aa11.16□□□□□ -0.62
APOBEC3C-202ENST00000428892 ITIH6Q6UXX5 1313 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 ASXL3Q9C0F0 2248 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 GOLGA8SH3BPF8 625 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 M0QYT0 321 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 VILLO15195 856 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 ENDOD1O94919 500 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 APOEP02649 317 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 GYPCP04921 128 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 DLDP09622 509 aaKnown RBP11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 C1SP09871 688 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 CCDC172P0C7W6 258 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 SLC2A3P11169 496 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 CCR1P32246 355 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 NSFP46459 744 aaKnown RBP11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 CXCR3P49682 368 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 CLDN6P56747 220 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 MS4A13Q5J8X5 152 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 HES3Q5TGS1 186 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 HGSNATQ68CP4 663 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 ZNF571Q7Z3V5 609 aaPredicted RBP11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 ZNF557Q8N988 423 aaPredicted RBP11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 WFDC5Q8TCV5 224 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 SYN2Q92777 582 aaPredicted RBP11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 TBCBQ99426 244 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 PRSS16Q9NQE7 514 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 FBXL12Q9NXK8 326 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 ARHGEF38Q9NXL2 777 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 ADAM22Q9P0K1 906 aa11.15□□□□□ -0.62
APOBEC3C-202ENST00000428892 TDRD6O60522 2096 aaKnown RBP11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 TEX51A0A1B0GUA7 166 aa11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 A0A1W2PPC4 97 aa11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 C2CD4BA6NLJ0 364 aa11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 CBX4O00257 560 aa11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 DDX3XO00571 662 aaKnown RBP eCLIP11.14□□□□□ -0.632e-10■□□□□ 9.3
APOBEC3C-202ENST00000428892 RNASEH2AO75792 299 aaKnown RBP11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 MOCS2O96007 188 aaPredicted RBP11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 TACR2P21452 398 aa11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 CD38P28907 300 aa11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 ACTN2P35609 894 aa11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 SULT1E1P49888 294 aa11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 RNASE9P60153 205 aaKnown RBP11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 RPS24P62847 133 aaKnown RBP11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 CXADRP78310 365 aa11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 TARDBPQ13148 414 aaKnown RBP eCLIP11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 ASIC2Q16515 512 aa11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 C5orf22Q49AR2 442 aa11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 TAF1BQ53T94 588 aaPredicted RBP11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 ARSIQ5FYB1 569 aa11.14□□□□□ -0.63
APOBEC3C-202ENST00000428892 BRMS1LQ5PSV4 323 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms