RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 CCDC114Q96M63 670 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 MYOCQ99972 504 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 VPS16Q9H269 839 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 KDM4CQ9H3R0 1056 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 FARP1Q9Y4F1 1045 aaPredicted RBP17.5■□□□□ 0.39
TRIM39-209ENST00000428728 TLR4O00206 839 aa17.49■□□□□ 0.39
TRIM39-209ENST00000428728 SMAD6O43541 496 aaKnown RBP17.49■□□□□ 0.39
TRIM39-209ENST00000428728 SRGAP2O75044 1071 aa17.49■□□□□ 0.39
TRIM39-209ENST00000428728 GLDCP23378 1020 aa17.49■□□□□ 0.39
TRIM39-209ENST00000428728 OR1E1P30953 314 aa17.49■□□□□ 0.39
TRIM39-209ENST00000428728 ARRB1P49407 418 aaPredicted RBP17.49■□□□□ 0.39
TRIM39-209ENST00000428728 ATP11AP98196 1134 aa17.49■□□□□ 0.39
TRIM39-209ENST00000428728 SETMARQ53H47 684 aaPredicted RBP17.49■□□□□ 0.39
TRIM39-209ENST00000428728 C22orf39Q6P5X5 142 aa17.49■□□□□ 0.39
TRIM39-209ENST00000428728 SETD3Q86TU7 594 aaPredicted RBP17.49■□□□□ 0.39
TRIM39-209ENST00000428728 TRIM69Q86WT6 500 aa17.49■□□□□ 0.39
TRIM39-209ENST00000428728 GALNT15Q8N3T1 639 aa17.49■□□□□ 0.39
TRIM39-209ENST00000428728 EMC1Q8N766 993 aa17.49■□□□□ 0.39
TRIM39-209ENST00000428728 KLK6Q92876 244 aa17.49■□□□□ 0.39
TRIM39-209ENST00000428728 CNDP2Q96KP4 475 aaKnown RBP17.49■□□□□ 0.39
TRIM39-209ENST00000428728 STK33Q9BYT3 514 aa17.49■□□□□ 0.39
TRIM39-209ENST00000428728 GANQ9H2C0 597 aa17.49■□□□□ 0.39
TRIM39-209ENST00000428728 TNKS2Q9H2K2 1166 aa17.49■□□□□ 0.39
TRIM39-209ENST00000428728 ARHGAP20Q9P2F6 1191 aa17.49■□□□□ 0.39
TRIM39-209ENST00000428728 CA5BQ9Y2D0 317 aa17.49■□□□□ 0.39
TRIM39-209ENST00000428728 DRGXA6NNA5 263 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 ENC1O14682 589 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 YKT6O15498 198 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 ENDOD1O94919 500 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 PRLRP16471 622 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 CHRNA3P32297 505 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 TAS2R38P59533 333 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 DNAJC3Q13217 504 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 KRT31Q15323 416 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 CDO1Q16878 200 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 C6orf118Q5T5N4 469 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 PIP5KL1Q5T9C9 394 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 PHLDB2Q86SQ0 1253 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 SPATS2Q86XZ4 545 aaKnown RBP17.48■□□□□ 0.39
TRIM39-209ENST00000428728 EID2Q8N6I1 236 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 MFSD2AQ8NA29 543 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 CHST14Q8NCH0 376 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 OR2A12Q8NGT7 310 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 SAP25Q8TEE9 199 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 ARRDC3Q96B67 414 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 SPON2Q9BUD6 331 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 NLRC4Q9NPP4 1024 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 DYRK4Q9NR20 520 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 FAM207AQ9NSI2 230 aaPredicted RBP17.48■□□□□ 0.39
TRIM39-209ENST00000428728 TMEM59LQ9UK28 342 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 NOCTQ9UK39 431 aaKnown RBP17.48■□□□□ 0.39
TRIM39-209ENST00000428728 LHX6Q9UPM6 363 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 DMTF1Q9Y222 760 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 ZZEF1O43149 2961 aa17.48■□□□□ 0.39
TRIM39-209ENST00000428728 ACACAQ13085 2346 aa17.47■□□□□ 0.39
TRIM39-209ENST00000428728 IGLV3-10A0A075B6K4 115 aa17.47■□□□□ 0.39
TRIM39-209ENST00000428728 RNGTTO60942 597 aaKnown RBP17.47■□□□□ 0.39
TRIM39-209ENST00000428728 LDOC1O95751 146 aaPredicted RBP17.47■□□□□ 0.39
TRIM39-209ENST00000428728 POLR2FP61218 127 aaKnown RBP17.47■□□□□ 0.39
TRIM39-209ENST00000428728 BNIP3Q12983 259 aa17.47■□□□□ 0.39
TRIM39-209ENST00000428728 STAT4Q14765 748 aa17.47■□□□□ 0.39
TRIM39-209ENST00000428728 RAB6CQ53S08 254 aa17.47■□□□□ 0.39
TRIM39-209ENST00000428728 DRC7Q8IY82 874 aa17.47■□□□□ 0.39
TRIM39-209ENST00000428728 OXR1Q8N573 874 aa17.47■□□□□ 0.39
TRIM39-209ENST00000428728 C1orf74Q96LT6 269 aa17.47■□□□□ 0.39
TRIM39-209ENST00000428728 HAPLN3Q96S86 360 aa17.47■□□□□ 0.39
TRIM39-209ENST00000428728 C11orf70Q9BRQ4 267 aa17.47■□□□□ 0.39
TRIM39-209ENST00000428728 ZYG11BQ9C0D3 744 aa17.47■□□□□ 0.39
TRIM39-209ENST00000428728 RAB6CQ9H0N0 254 aa17.47■□□□□ 0.39
TRIM39-209ENST00000428728 PREBQ9HCU5 417 aa17.47■□□□□ 0.39
TRIM39-209ENST00000428728 FZD3Q9NPG1 666 aa17.47■□□□□ 0.39
TRIM39-209ENST00000428728 A0A1W2PQU0 124 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 RNF103O00237 685 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 EPHB6O15197 1021 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 SLC31A1O15431 190 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 SDC3O75056 442 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 GJB6O95452 261 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 PRNPP04156 253 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 TPM2P07951 284 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 NUDT1P36639 197 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 RECQLP46063 649 aaPredicted RBP17.46■□□□□ 0.39
TRIM39-209ENST00000428728 CLCN6P51797 869 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 CLDN6P56747 220 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 FMO1Q01740 532 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 C15orf59Q2T9L4 293 aaPredicted RBP17.46■□□□□ 0.39
TRIM39-209ENST00000428728 CT47A1Q5JQC4 288 aaPredicted RBP17.46■□□□□ 0.39
TRIM39-209ENST00000428728 ARTNQ5T4W7 220 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 ACBD5Q5T8D3 534 aaPredicted RBP17.46■□□□□ 0.39
TRIM39-209ENST00000428728 CDKAL1Q5VV42 579 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 BNIPLQ7Z465 357 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 ZNF677Q86XU0 584 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 ENOX1Q8TC92 643 aaKnown RBP17.46■□□□□ 0.39
TRIM39-209ENST00000428728 ATP13A1Q9HD20 1204 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 LMBRD1Q9NUN5 540 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 IL36AQ9UHA7 158 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 DMXL2Q8TDJ6 3036 aa17.46■□□□□ 0.39
TRIM39-209ENST00000428728 APC2O95996 2303 aa17.46■□□□□ 0.38
TRIM39-209ENST00000428728 ILVBLA1L0T0 632 aa17.45■□□□□ 0.38
TRIM39-209ENST00000428728 PRAMEF26H0Y7S4 382 aa17.45■□□□□ 0.38
TRIM39-209ENST00000428728 MAGEC1O60732 1142 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms