RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 GANQ9H2C0 597 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 GDF3Q9NR23 364 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 RRN3Q9NYV6 651 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 STAP1Q9ULZ2 295 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 LHX6Q9UPM6 363 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 TRABD2BA6NFA1 517 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 F8VZ95 297 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 GOLGA8SH3BPF8 625 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 EPHB6O15197 1021 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 ALOX15BO15296 676 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 ZNF821O75541 412 aaPredicted RBP15.9■□□□□ 0.14
SEC13-210ENST00000428626 SNX16P57768 344 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 NOMO3P69849 1222 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 MTA1Q13330 715 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 TCP11X2Q5H9J9 407 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 SFMBT2Q5VUG0 894 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 FAM46CQ5VWP2 391 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 DSG4Q86SJ6 1040 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 TRIM69Q86WT6 500 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 EID2Q8N6I1 236 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 EMC1Q8N766 993 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 MFSD2AQ8NA29 543 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 ATP11CQ8NB49 1132 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 KLK6Q92876 244 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 C1orf74Q96LT6 269 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 MAGEB5Q9BZ81 275 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 KDM4CQ9H3R0 1056 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 TAB2Q9NYJ8 693 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 NOCTQ9UK39 431 aaKnown RBP15.9■□□□□ 0.14
SEC13-210ENST00000428626 RAXQ9Y2V3 346 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 ACTL7AQ9Y615 435 aa15.9■□□□□ 0.14
SEC13-210ENST00000428626 LOC400499M0QZD8 3231 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 IGSF10Q6WRI0 2623 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 E9PAM4 449 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 C1QTNF3-AMACRE9PGA6 284 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 ENC1O14682 589 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 ZMPSTE24O75844 475 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 ITGAVP06756 1048 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 ZNF18P17022 549 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 CHRNB2P17787 502 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 CHRNA3P32297 505 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 RXRGP48443 463 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 CYP4F3Q08477 520 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 NAA35Q5VZE5 725 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 PHLDB2Q86SQ0 1253 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 SETD3Q86TU7 594 aaPredicted RBP15.89■□□□□ 0.13
SEC13-210ENST00000428626 PRPF39Q86UA1 669 aaKnown RBP15.89■□□□□ 0.13
SEC13-210ENST00000428626 FAM131BQ86XD5 332 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 DCAF4L2Q8NA75 395 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 TMEM145Q8NBT3 493 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 TSC1Q92574 1164 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 SKA1Q96BD8 255 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 CNDP2Q96KP4 475 aaKnown RBP15.89■□□□□ 0.13
SEC13-210ENST00000428626 PPP1R9BQ96SB3 815 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 MYOCQ99972 504 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 STK33Q9BYT3 514 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 NUP62CLQ9H1M0 184 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 PDCL3Q9H2J4 239 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 TNKS2Q9H2K2 1166 aa15.89■□□□□ 0.13
SEC13-210ENST00000428626 TPX2Q9ULW0 747 aaKnown RBP15.89■□□□□ 0.13
SEC13-210ENST00000428626 FASNP49327 2511 aaKnown RBP15.89■□□□□ 0.13
SEC13-210ENST00000428626 TDRD6O60522 2096 aaKnown RBP15.88■□□□□ 0.13
SEC13-210ENST00000428626 CHD5Q8TDI0 1954 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 KPNA3O00505 521 aaPredicted RBP15.88■□□□□ 0.13
SEC13-210ENST00000428626 PES1O00541 588 aaKnown RBP15.88■□□□□ 0.13
SEC13-210ENST00000428626 RNGTTO60942 597 aaKnown RBP15.88■□□□□ 0.13
SEC13-210ENST00000428626 SRGAP2O75044 1071 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 SDC3O75056 442 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 ENDOD1O94919 500 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 GJB6O95452 261 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 LDOC1O95751 146 aaPredicted RBP15.88■□□□□ 0.13
SEC13-210ENST00000428626 LSM8O95777 96 aaKnown RBP15.88■□□□□ 0.13
SEC13-210ENST00000428626 CD160O95971 181 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 F9P00740 461 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 PRLRP16471 622 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 ACADVLP49748 655 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 KRT83P78385 493 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 C22orf39Q6P5X5 142 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 DPY19L3Q6ZPD9 716 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 GALNT15Q8N3T1 639 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 GRIN3AQ8TCU5 1115 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 VOPP1Q96AW1 172 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 C2orf49Q9BVC5 232 aaPredicted RBP15.88■□□□□ 0.13
SEC13-210ENST00000428626 ERVMER34-1Q9H9K5 563 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 FZD3Q9NPG1 666 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 METTL5Q9NRN9 209 aaKnown RBP15.88■□□□□ 0.13
SEC13-210ENST00000428626 NDFIP2Q9NV92 336 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 DKK4Q9UBT3 224 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 ZFR2Q9UPR6 939 aaKnown RBP15.88■□□□□ 0.13
SEC13-210ENST00000428626 DMTF1Q9Y222 760 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 WASF2Q9Y6W5 498 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 ASXL3Q9C0F0 2248 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 MYLKQ15746 1914 aa15.88■□□□□ 0.13
SEC13-210ENST00000428626 SMG1Q96Q15 3661 aaKnown RBP15.88■□□□□ 0.13
SEC13-210ENST00000428626 BAHCC1Q9P281 2608 aa15.87■□□□□ 0.13
SEC13-210ENST00000428626 TRPM6Q9BX84 2022 aa15.87■□□□□ 0.13
SEC13-210ENST00000428626 A0A1W2PQU0 124 aa15.87■□□□□ 0.13
SEC13-210ENST00000428626 SLC31A1O15431 190 aa15.87■□□□□ 0.13
SEC13-210ENST00000428626 GFPT2O94808 682 aa15.87■□□□□ 0.13
SEC13-210ENST00000428626 CYP1A1P04798 512 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms