RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 PYROXD1Q8WU10 500 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 PTCD2Q8WV60 388 aaKnown RBP9.25□□□□□ -0.93
NR1I3-209ENST00000428574 UBLCP1Q8WVY7 318 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-209ENST00000428574 ACDQ96AP0 544 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 TADA1Q96BN2 335 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 PGM2Q96G03 612 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 CELF6Q96J87 481 aaKnown RBP9.25□□□□□ -0.93
NR1I3-209ENST00000428574 ZIM3Q96PE6 472 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 PSKH2Q96QS6 385 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 CYP2S1Q96SQ9 504 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 C2orf49Q9BVC5 232 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-209ENST00000428574 SEMA4AQ9H3S1 761 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 C10orf88Q9H8K7 445 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 PIDD1Q9HB75 910 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 ARNT2Q9HBZ2 717 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 SAYSD1Q9NPB0 183 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 NDFIP2Q9NV92 336 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 HCFC1R1Q9NWW0 138 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 SMPD4Q9NXE4 827 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 NINJ2Q9NZG7 142 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 PCDH10Q9P2E7 1040 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 SEPT3Q9UH03 358 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 MRPS23Q9Y3D9 190 aaKnown RBP9.25□□□□□ -0.93
NR1I3-209ENST00000428574 TEX264Q9Y6I9 313 aa9.25□□□□□ -0.93
NR1I3-209ENST00000428574 GOLGA6L7A0A1B0GV03 622 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 HMGB1P1B2RPK0 211 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-209ENST00000428574 AGPSO00116 658 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 ZBTB24O43167 697 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-209ENST00000428574 JCHAINP01591 159 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 MYZAPP0CAP1 466 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 IRF1P10914 325 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 NFKB1P19838 968 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 PSMB4P28070 264 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 ATP5DP30049 168 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 CD68P34810 354 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-209ENST00000428574 MAPK8P45983 427 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 NPY2RP49146 381 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 LMAN1P49257 510 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 IRAK1P51617 712 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 RPS24P62847 133 aaKnown RBP9.24□□□□□ -0.93
NR1I3-209ENST00000428574 ZXDBP98169 803 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 ZNF844Q08AG5 666 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 IFFO1Q0D2I5 559 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 CDH17Q12864 832 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 NAB1Q13506 487 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 CDH18Q13634 790 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 LAMB3Q13751 1172 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 SLC29A2Q14542 456 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 TEAD2Q15562 447 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 AGBL2Q5U5Z8 902 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 ZNF534Q76KX8 674 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 GRASPQ7Z6J2 395 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-209ENST00000428574 PRUNE1Q86TP1 453 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 CAND1Q86VP6 1230 aaKnown RBP9.24□□□□□ -0.93
NR1I3-209ENST00000428574 TP53INP2Q8IXH6 220 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 ZBED8Q8IZ13 594 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 USP13Q92995 863 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-209ENST00000428574 IMP4Q96G21 291 aaKnown RBP9.24□□□□□ -0.93
NR1I3-209ENST00000428574 GDAP1L1Q96MZ0 367 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 MGME1Q9BQP7 344 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 POLR1EQ9GZS1 481 aaKnown RBP9.24□□□□□ -0.93
NR1I3-209ENST00000428574 IL22Q9GZX6 179 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 CASS4Q9NQ75 786 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 RBM22Q9NW64 420 aaKnown RBP eCLIP9.24□□□□□ -0.93
NR1I3-209ENST00000428574 SEPT10Q9P0V9 454 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 KIAA1522Q9P206 1035 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-209ENST00000428574 ARIH1Q9Y4X5 557 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-209ENST00000428574 OR51B4Q9Y5P0 310 aa9.24□□□□□ -0.93
NR1I3-209ENST00000428574 CHD5Q8TDI0 1954 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 TCRBV7S3A2A0A539 114 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 SDR42E2A6NKP2 422 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 A6NNZ2 444 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 H0Y626 953 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 PER2O15055 1255 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 HOXC11O43248 304 aaPredicted RBP9.23□□□□□ -0.93
NR1I3-209ENST00000428574 TBL1XO60907 577 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 CDH16O75309 829 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 CA4P22748 312 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 FSHRP23945 695 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 STX2P32856 288 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 CSNK1DP48730 415 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 NRLP54845 237 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 SULT2A1Q06520 285 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 NSUN2Q08J23 767 aaKnown RBP eCLIP9.23□□□□□ -0.93
NR1I3-209ENST00000428574 HYAL1Q12794 435 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 NR1H3Q13133 447 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 ZNF235Q14590 738 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 KLHL38Q2WGJ6 581 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 TUBB8Q3ZCM7 444 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 FNBP1LQ5T0N5 605 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 EMC10Q5UCC4 262 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 STEAP4Q687X5 459 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 RETSATQ6NUM9 610 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 ANKRD54Q6NXT1 300 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 MFN1Q8IWA4 741 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 BBS7Q8IWZ6 715 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.23□□□□□ -0.93
NR1I3-209ENST00000428574 SMARCD2Q92925 531 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 PEX13Q92968 403 aa9.23□□□□□ -0.93
NR1I3-209ENST00000428574 ISG20Q96AZ6 181 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms