RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 LATO43561 262 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 SYPP08247 313 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 GOT1P17174 413 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 CSRP1P21291 193 aaKnown RBP9.35□□□□□ -0.91
SMC1A-203ENST00000428014 MZF1P28698 734 aaPredicted RBP9.35□□□□□ -0.91
SMC1A-203ENST00000428014 MAN1A1P33908 653 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 SPEM2Q0P670 501 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 DPYSL2Q16555 572 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 C15orf59Q2T9L4 293 aaPredicted RBP9.35□□□□□ -0.91
SMC1A-203ENST00000428014 ERMARDQ5T6L9 678 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 C14orf80Q86SX3 495 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 PACS2Q86VP3 889 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 IQCHQ86VS3 1027 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 KIAA2013Q8IYS2 634 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 APCDD1Q8J025 514 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 DCLK2Q8N568 766 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 CYB5D2Q8WUJ1 264 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 SORCS1Q8WY21 1168 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 TOE1Q96GM8 510 aaKnown RBP9.35□□□□□ -0.91
SMC1A-203ENST00000428014 PPP1R16AQ96I34 528 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 PSMB7Q99436 277 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 HDAC8Q9BY41 377 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 KRTAP3-3Q9BYR6 98 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 KRTAP3-2Q9BYR7 98 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 MUC3BQ9H195 1237 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 PREBQ9HCU5 417 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 ZDHHC4Q9NPG8 344 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 SEPT11Q9NVA2 429 aaKnown RBP9.35□□□□□ -0.91
SMC1A-203ENST00000428014 POLR3BQ9NW08 1133 aaPredicted RBP9.35□□□□□ -0.91
SMC1A-203ENST00000428014 ZNHIT6Q9NWK9 470 aaKnown RBP9.35□□□□□ -0.91
SMC1A-203ENST00000428014 CNOT8Q9UFF9 292 aaKnown RBP9.35□□□□□ -0.91
SMC1A-203ENST00000428014 IP6K2Q9UHH9 426 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 VPS51Q9UID3 782 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 HPCAL4Q9UM19 191 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 USP18Q9UMW8 372 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 DMTF1Q9Y222 760 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.35□□□□□ -0.91
SMC1A-203ENST00000428014 PCDHGB2Q9Y5G2 931 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 RAD54BQ9Y620 910 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 PCNX2A6NKB5 2137 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 DCHS1Q96JQ0 3298 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 KNL1Q8NG31 2342 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 SYNJ2BP-COX16A0A087WUM0 186 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 KDELR3O43731 214 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 AP1G1O43747 822 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 PRPSAP2O60256 369 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 RAMP2O60895 175 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 SIN3BO75182 1162 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 LRCH4O75427 683 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 MTA2O94776 668 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 CNTN5O94779 1100 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 SEMA4FO95754 770 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 GSRP00390 522 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 H2AFZP0C0S5 128 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 SRCP12931 536 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 PSMA2P25787 234 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 CD27P26842 260 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 CASP14P31944 242 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 PTGER3P43115 390 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 GRIA4P48058 902 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 CSNK1DP48730 415 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 DHPSP49366 369 aaPredicted RBP9.34□□□□□ -0.91
SMC1A-203ENST00000428014 SERPINH1P50454 418 aaKnown RBP9.34□□□□□ -0.91
SMC1A-203ENST00000428014 HADHBP55084 474 aaKnown RBP9.34□□□□□ -0.91
SMC1A-203ENST00000428014 CREB5Q02930 508 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 TBX2Q13207 712 aaPredicted RBP9.34□□□□□ -0.91
SMC1A-203ENST00000428014 RFTN1Q14699 578 aaPredicted RBP9.34□□□□□ -0.91
SMC1A-203ENST00000428014 DLG2Q15700 870 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 C2CD6Q53TS8 623 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 TDRD12Q587J7 1177 aaKnown RBP9.34□□□□□ -0.91
SMC1A-203ENST00000428014 RALGPS1Q5JS13 557 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 DAB2IPQ5VWQ8 1189 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 KIAA1324Q6UXG2 1013 aaKnown RBP9.34□□□□□ -0.91
SMC1A-203ENST00000428014 H2AFVQ71UI9 128 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 TRIM69Q86WT6 500 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 SLC41A1Q8IVJ1 513 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 OR52K2Q8NGK3 314 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 OR2T34Q8NGX1 318 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 RLN3Q8WXF3 142 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 ASB12Q8WXK4 309 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 ARHGEF2Q92974 986 aaKnown RBP9.34□□□□□ -0.91
SMC1A-203ENST00000428014 FATE1Q969F0 183 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 RAB7BQ96AH8 199 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 SKA1Q96BD8 255 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 ZNF653Q96CK0 615 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 ARHGEF26Q96DR7 871 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 MRFAP1L1Q96HT8 127 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 OSBPL1AQ9BXW6 950 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 ABHD10Q9NUJ1 306 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 DNAAF2Q9NVR5 837 aaKnown RBP9.34□□□□□ -0.91
SMC1A-203ENST00000428014 TAS2R14Q9NYV8 317 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 COX16Q9P0S2 106 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 ARHGAP20Q9P2F6 1191 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 SLCO3A1Q9UIG8 710 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 CYP8B1Q9UNU6 501 aa9.34□□□□□ -0.91
SMC1A-203ENST00000428014 PCDH15Q96QU1 1955 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 A0A087X0T9 212 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 LNP1A1A4G5 178 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 TTC34A8MYJ7 566 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms