RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 VPS36Q86VN1 386 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 ZCCHC9Q8N567 271 aaKnown RBP15.21■□□□□ 0.03
RTN4-210ENST00000427710 CHST14Q8NCH0 376 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 OR8D1Q8WZ84 308 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 FOXJ1Q92949 421 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 ARHGEF2Q92974 986 aaKnown RBP15.21■□□□□ 0.03
RTN4-210ENST00000427710 IQCDQ96DY2 449 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 KCTD15Q96SI1 283 aaPredicted RBP15.21■□□□□ 0.03
RTN4-210ENST00000427710 OMDQ99983 421 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 SNRNP25Q9BV90 132 aaKnown RBP15.21■□□□□ 0.03
RTN4-210ENST00000427710 KLC2Q9H0B6 622 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 DHX35Q9H5Z1 703 aaKnown RBP15.21■□□□□ 0.03
RTN4-210ENST00000427710 EIF2B4Q9UI10 523 aaKnown RBP15.21■□□□□ 0.03
RTN4-210ENST00000427710 AP4E1Q9UPM8 1137 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 HS3ST2Q9Y278 367 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 NCKAP1Q9Y2A7 1128 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 FCF1Q9Y324 198 aaKnown RBP15.21■□□□□ 0.03
RTN4-210ENST00000427710 SCINQ9Y6U3 715 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 CACNA1AO00555 2505 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 CTSLP07711 333 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 MYBL1P10243 752 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 ENGP17813 658 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 MAPKAPK2P49137 400 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 VASPP50552 380 aaPredicted RBP15.2■□□□□ 0.02
RTN4-210ENST00000427710 GFPT1Q06210 699 aaPredicted RBP15.2■□□□□ 0.02
RTN4-210ENST00000427710 SEMA3BQ13214 749 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 ELAVL3Q14576 367 aaKnown RBP15.2■□□□□ 0.02
RTN4-210ENST00000427710 UAP1L1Q3KQV9 507 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 WDR45BQ5MNZ6 344 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 SYCP2LQ5T4T6 812 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 C22orf39Q6P5X5 142 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 ALKBH5Q6P6C2 394 aaKnown RBP15.2■□□□□ 0.02
RTN4-210ENST00000427710 SLC23A3Q6PIS1 610 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.2■□□□□ 0.02
RTN4-210ENST00000427710 CYP4V2Q6ZWL3 525 aaPredicted RBP15.2■□□□□ 0.02
RTN4-210ENST00000427710 ZNF354CQ86Y25 554 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 CPNE8Q86YQ8 564 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 CADM4Q8NFZ8 388 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 PIP4K2CQ8TBX8 421 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 TRIM11Q96F44 468 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 CHP1Q99653 195 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 NUP85Q9BW27 656 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 GTPBP2Q9BX10 602 aaKnown RBP15.2■□□□□ 0.02
RTN4-210ENST00000427710 NUSAP1Q9BXS6 441 aaKnown RBP15.2■□□□□ 0.02
RTN4-210ENST00000427710 PACSIN1Q9BY11 444 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 ACE2Q9BYF1 805 aaPredicted RBP15.2■□□□□ 0.02
RTN4-210ENST00000427710 RBSNQ9H1K0 784 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 NOL6Q9H6R4 1146 aaKnown RBP15.2■□□□□ 0.02
RTN4-210ENST00000427710 SGK2Q9HBY8 427 aa15.2■□□□□ 0.02
RTN4-210ENST00000427710 EVLQ9UI08 416 aaPredicted RBP15.2■□□□□ 0.02
RTN4-210ENST00000427710 CDX4O14627 284 aaPredicted RBP15.19■□□□□ 0.02
RTN4-210ENST00000427710 FOXD2O60548 495 aaPredicted RBP15.19■□□□□ 0.02
RTN4-210ENST00000427710 LRCH4O75427 683 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 ZNF821O75541 412 aaPredicted RBP15.19■□□□□ 0.02
RTN4-210ENST00000427710 RNF8O76064 485 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 CD160O95971 181 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 ADH1BP00325 375 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 DESP17661 470 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 C5AR1P21730 350 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 IL1R2P27930 398 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 DRD3P35462 400 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 DNA2P51530 1060 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 GALCP54803 685 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 TPI1P60174 286 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 POLD3Q15054 466 aaPredicted RBP15.19■□□□□ 0.02
RTN4-210ENST00000427710 ERMARDQ5T6L9 678 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 NCEH1Q6PIU2 408 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 ZNF783Q6ZMS7 281 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 USP30Q70CQ3 517 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 RTL3Q8N8U3 475 aaKnown RBP15.19■□□□□ 0.02
RTN4-210ENST00000427710 OR8K1Q8NGG5 319 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 DNASE2BQ8WZ79 361 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 EPAS1Q99814 870 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 RTKNQ9BST9 563 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 CAPN10Q9HC96 672 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 MRPL47Q9HD33 250 aaKnown RBP15.19■□□□□ 0.02
RTN4-210ENST00000427710 NENFQ9UMX5 172 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 SCML1Q9UN30 329 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 SLC6A14Q9UN76 642 aa15.19■□□□□ 0.02
RTN4-210ENST00000427710 LRRK1Q38SD2 2015 aa15.18■□□□□ 0.02
RTN4-210ENST00000427710 EEF2KO00418 725 aaKnown RBP15.18■□□□□ 0.02
RTN4-210ENST00000427710 PRPSAP2O60256 369 aa15.18■□□□□ 0.02
RTN4-210ENST00000427710 RAMP2O60895 175 aa15.18■□□□□ 0.02
RTN4-210ENST00000427710 CYP1A2P05177 515 aa15.18■□□□□ 0.02
RTN4-210ENST00000427710 SERPINF2P08697 491 aa15.18■□□□□ 0.02
RTN4-210ENST00000427710 GOT1P17174 413 aa15.18■□□□□ 0.02
RTN4-210ENST00000427710 HNRNPH3P31942 346 aaKnown RBP15.18■□□□□ 0.02
RTN4-210ENST00000427710 GKP32189 559 aa15.18■□□□□ 0.02
RTN4-210ENST00000427710 SERPINH1P50454 418 aaKnown RBP15.18■□□□□ 0.02
RTN4-210ENST00000427710 LIMK1P53667 647 aa15.18■□□□□ 0.02
RTN4-210ENST00000427710 CNTN1Q12860 1018 aa15.18■□□□□ 0.02
RTN4-210ENST00000427710 TRIM14Q14142 442 aa15.18■□□□□ 0.02
RTN4-210ENST00000427710 SMTNL2Q2TAL5 461 aa15.18■□□□□ 0.02
RTN4-210ENST00000427710 PPP6R3Q5H9R7 873 aaPredicted RBP15.18■□□□□ 0.02
RTN4-210ENST00000427710 KIAA0895LQ68EN5 471 aa15.18■□□□□ 0.02
RTN4-210ENST00000427710 TXNRD3NBQ6F5E7 133 aa15.18■□□□□ 0.02
RTN4-210ENST00000427710 LAYNQ6UX15 382 aa15.18■□□□□ 0.02
RTN4-210ENST00000427710 DPY19L3Q6ZPD9 716 aa15.18■□□□□ 0.02
RTN4-210ENST00000427710 OR2A12Q8NGT7 310 aa15.18■□□□□ 0.02
RTN4-210ENST00000427710 OR14C36Q8NHC7 312 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms