RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 SHOC2Q9UQ13 582 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 TECTAO75443 2155 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 FAM72CH0Y354 149 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 HOXC11O43248 304 aaPredicted RBP15.99■□□□□ 0.15
SHOX2-202ENST00000425436 TTC4O95801 387 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 RBP3P10745 1247 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 OPRD1P41143 372 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 IRAK1P51617 712 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 ZNF135P52742 658 aaPredicted RBP15.99■□□□□ 0.15
SHOX2-202ENST00000425436 GYS2P54840 703 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 PRKCQQ04759 706 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 MESP2Q0VG99 397 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 XRCC4Q13426 336 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 FAM72AQ5TYM5 149 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 FAM72DQ6L9T8 149 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 KDM7AQ6ZMT4 941 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 CCDC25Q86WR0 208 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 FAM72BQ86X60 149 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 CIR1Q86X95 450 aaPredicted RBP15.99■□□□□ 0.15
SHOX2-202ENST00000425436 PLD5Q8N7P1 536 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 C1orf74Q96LT6 269 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 FAM118BQ9BPY3 351 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 EPB41L4BQ9H329 900 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 MARK1Q9P0L2 795 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 OR12D3Q9UGF7 316 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 NDRG2Q9UN36 371 aaKnown RBP15.99■□□□□ 0.15
SHOX2-202ENST00000425436 MTF2Q9Y483 593 aaPredicted RBP15.99■□□□□ 0.15
SHOX2-202ENST00000425436 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.99■□□□□ 0.15
SHOX2-202ENST00000425436 TMEM221A6NGB7 291 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 M0R296 226 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 TULP3O75386 442 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 PENKP01210 267 aaPredicted RBP15.99■□□□□ 0.15
SHOX2-202ENST00000425436 IFNB1P01574 187 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 GLULP15104 373 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 IL4RP24394 825 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 HOXD9P28356 352 aaPredicted RBP15.99■□□□□ 0.15
SHOX2-202ENST00000425436 L1CAMP32004 1257 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 ARL4AP40617 200 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 LMAN1P49257 510 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 VPS41P49754 854 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 STARD6P59095 220 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 CA9Q16790 459 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 DARS2Q6PI48 645 aaKnown RBP15.99■□□□□ 0.15
SHOX2-202ENST00000425436 ZNF852Q6ZMS4 543 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 PPIL6Q8IXY8 311 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 NTAN1Q96AB6 310 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 RPRD1AQ96P16 312 aaPredicted RBP15.99■□□□□ 0.15
SHOX2-202ENST00000425436 P2RY13Q9BPV8 354 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 FOXQ1Q9C009 403 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 TBC1D17Q9HA65 648 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 DNAJC17Q9NVM6 304 aaKnown RBP15.99■□□□□ 0.15
SHOX2-202ENST00000425436 AP4E1Q9UPM8 1137 aa15.99■□□□□ 0.15
SHOX2-202ENST00000425436 ATG2BQ96BY7 2078 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 BCLAF3A2AJT9 711 aaKnown RBP15.98■□□□□ 0.15
SHOX2-202ENST00000425436 E9PAM4 449 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 EIF3HO15372 352 aaKnown RBP eCLIP15.98■□□□□ 0.15
SHOX2-202ENST00000425436 TCEA3O75764 348 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 NR1D1P20393 614 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 ATP5DP30049 168 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 KDSRQ06136 332 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 MTA1Q13330 715 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 UBXN2BQ14CS0 331 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 EFHC2Q5JST6 749 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 ARTNQ5T4W7 220 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 ASTLQ6HA08 431 aaPredicted RBP15.98■□□□□ 0.15
SHOX2-202ENST00000425436 CENPUQ71F23 418 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 ZNF771Q7L3S4 317 aaPredicted RBP15.98■□□□□ 0.15
SHOX2-202ENST00000425436 SFTPA1Q8IWL2 248 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 ETFBKMTQ8IXQ9 262 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 ZNF683Q8IZ20 524 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 CARNMT1Q8N4J0 409 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 HJURPQ8NCD3 748 aaPredicted RBP15.98■□□□□ 0.15
SHOX2-202ENST00000425436 FLCNQ8NFG4 579 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 SHDQ96IW2 340 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 XPO6Q96QU8 1125 aaKnown RBP15.98■□□□□ 0.15
SHOX2-202ENST00000425436 FRMD8Q9BZ67 464 aaPredicted RBP15.98■□□□□ 0.15
SHOX2-202ENST00000425436 OSBPL2Q9H1P3 480 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 CDC42EP4Q9H3Q1 356 aaKnown RBP15.98■□□□□ 0.15
SHOX2-202ENST00000425436 CENPHQ9H3R5 247 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 MFSD1Q9H3U5 465 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 DHX35Q9H5Z1 703 aaKnown RBP15.98■□□□□ 0.15
SHOX2-202ENST00000425436 PPCSQ9HAB8 311 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 MPP6Q9NZW5 540 aa15.98■□□□□ 0.15
SHOX2-202ENST00000425436 KANSL1LA0AUZ9 987 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 ANTXRLA6NF34 631 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 H7C0C1 242 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 MAN2B1O00754 1011 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 RASGRF2O14827 1237 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 CREB3O43889 395 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 CACNG3O60359 315 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 CNTN5O94779 1100 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 IVLP07476 585 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 ABHD2P08910 425 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 CISD3P0C7P0 127 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 ATP5OP48047 213 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 DMTNQ08495 405 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 SCAPQ12770 1279 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 MMRN1Q13201 1228 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 ALFQ53S48 1182 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 RABGAP1LQ5R372 815 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms