RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 ZSCAN5CA6NGD5 496 aaPredicted RBP15.13■□□□□ 0.01
TMEM248-204ENST00000424964 DFFAO00273 331 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 SMAD6O43541 496 aaKnown RBP15.13■□□□□ 0.01
TMEM248-204ENST00000424964 PSTPIP1O43586 416 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 KRT86O43790 486 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 RNASEH1O60930 286 aaKnown RBP15.13■□□□□ 0.01
TMEM248-204ENST00000424964 CCDC175P0C221 793 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 VAV1P15498 845 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 SERPINH1P50454 418 aaKnown RBP15.13■□□□□ 0.01
TMEM248-204ENST00000424964 PAPOLAP51003 745 aaKnown RBP15.13■□□□□ 0.01
TMEM248-204ENST00000424964 CLCN6P51797 869 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 COPAP53621 1224 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 SRSF5Q13243 272 aaKnown RBP15.13■□□□□ 0.01
TMEM248-204ENST00000424964 SERINC3Q13530 473 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 ANKRD20A8PQ5CZ79 823 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 CACUL1Q86Y37 369 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 FANCMQ8IYD8 2048 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 STK40Q8N2I9 435 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 NPWQ8N729 165 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 FRS2Q8WU20 508 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 PTPRN2Q92932 1015 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 RNF25Q96BH1 459 aaPredicted RBP15.13■□□□□ 0.01
TMEM248-204ENST00000424964 SIPA1Q96FS4 1042 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 MAK16Q9BXY0 300 aaKnown RBP15.13■□□□□ 0.01
TMEM248-204ENST00000424964 KLC2Q9H0B6 622 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 GUCA1BQ9UMX6 200 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.13■□□□□ 0.01
TMEM248-204ENST00000424964 ARIH1Q9Y4X5 557 aaPredicted RBP15.13■□□□□ 0.01
TMEM248-204ENST00000424964 ACTL7AQ9Y615 435 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 EML5Q05BV3 1969 aa15.13■□□□□ 0.01
TMEM248-204ENST00000424964 HRO43593 1189 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 LILRB5O75023 590 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 PALMO75781 387 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 RPP40O75818 363 aaKnown RBP15.12■□□□□ 0.01
TMEM248-204ENST00000424964 ACADMP11310 421 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 CNR2P34972 360 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 SERPINB6P35237 376 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 RECQLP46063 649 aaPredicted RBP15.12■□□□□ 0.01
TMEM248-204ENST00000424964 DNA2P51530 1060 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 NHLH1Q02575 133 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 BYSLQ13895 437 aaKnown RBP15.12■□□□□ 0.01
TMEM248-204ENST00000424964 AFMIDQ63HM1 303 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 Q6ZVU0 165 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 CEP68Q76N32 757 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 ARHGAP12Q8IWW6 846 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 SYCE1Q8N0S2 351 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 PCDH19Q8TAB3 1148 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.12■□□□□ 0.01
TMEM248-204ENST00000424964 RLN3Q8WXF3 142 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 PDLIM2Q96JY6 352 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 CCDC114Q96M63 670 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 RNF157Q96PX1 679 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 TNKS2Q9H2K2 1166 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 SP110Q9HB58 689 aa15.12■□□□□ 0.01
TMEM248-204ENST00000424964 FCF1Q9Y324 198 aaKnown RBP15.12■□□□□ 0.01
TMEM248-204ENST00000424964 FARP1Q9Y4F1 1045 aaPredicted RBP15.12■□□□□ 0.01
TMEM248-204ENST00000424964 CXorf51AA0A1B0GTR3 108 aa15.11■□□□□ 0.01
TMEM248-204ENST00000424964 J3KR12 359 aa15.11■□□□□ 0.01
TMEM248-204ENST00000424964 ZNF217O75362 1048 aa15.11■□□□□ 0.01
TMEM248-204ENST00000424964 ZRANB2O95218 330 aaKnown RBP eCLIP15.11■□□□□ 0.01
TMEM248-204ENST00000424964 DNTTP04053 509 aa15.11■□□□□ 0.01
TMEM248-204ENST00000424964 RPS14P62263 151 aaKnown RBP15.11■□□□□ 0.01
TMEM248-204ENST00000424964 SIM2Q14190 667 aaPredicted RBP15.11■□□□□ 0.01
TMEM248-204ENST00000424964 ZNF776Q68DI1 518 aaPredicted RBP15.11■□□□□ 0.01
TMEM248-204ENST00000424964 C22orf39Q6P5X5 142 aa15.11■□□□□ 0.01
TMEM248-204ENST00000424964 PRR23BQ6ZRT6 265 aa15.11■□□□□ 0.01
TMEM248-204ENST00000424964 PEX26Q7Z412 305 aa15.11■□□□□ 0.01
TMEM248-204ENST00000424964 MMAAQ8IVH4 418 aaKnown RBP15.11■□□□□ 0.01
TMEM248-204ENST00000424964 TP53INP2Q8IXH6 220 aa15.11■□□□□ 0.01
TMEM248-204ENST00000424964 RNF10Q8N5U6 811 aaKnown RBP15.11■□□□□ 0.01
TMEM248-204ENST00000424964 GAB3Q8WWW8 586 aa15.11■□□□□ 0.01
TMEM248-204ENST00000424964 OR8D1Q8WZ84 308 aa15.11■□□□□ 0.01
TMEM248-204ENST00000424964 KRT35Q92764 455 aa15.11■□□□□ 0.01
TMEM248-204ENST00000424964 FAF2Q96CS3 445 aa15.11■□□□□ 0.01
TMEM248-204ENST00000424964 SPACA7Q96KW9 195 aa15.11■□□□□ 0.01
TMEM248-204ENST00000424964 ZNF830Q96NB3 372 aaPredicted RBP15.11■□□□□ 0.01
TMEM248-204ENST00000424964 FAM129BQ96TA1 746 aa15.11■□□□□ 0.01
TMEM248-204ENST00000424964 CEP44Q9C0F1 390 aa15.11■□□□□ 0.01
TMEM248-204ENST00000424964 RSPH9Q9H1X1 276 aaPredicted RBP15.11■□□□□ 0.01
TMEM248-204ENST00000424964 UBA2Q9UBT2 640 aaPredicted RBP15.11■□□□□ 0.01
TMEM248-204ENST00000424964 AMFRQ9UKV5 643 aa15.11■□□□□ 0.01
TMEM248-204ENST00000424964 NYNRINQ9P2P1 1898 aaKnown RBP15.1■□□□□ 0.01
TMEM248-204ENST00000424964 C3orf70A6NLC5 250 aaPredicted RBP15.1■□□□□ 0.01
TMEM248-204ENST00000424964 ZNF487B1APH4 448 aa15.1■□□□□ 0.01
TMEM248-204ENST00000424964 MAP3K13O43283 966 aa15.1■□□□□ 0.01
TMEM248-204ENST00000424964 PRAMEF11O60813 436 aa15.1■□□□□ 0.01
TMEM248-204ENST00000424964 TMCC1O94876 653 aa15.1■□□□□ 0.01
TMEM248-204ENST00000424964 CD160O95971 181 aa15.1■□□□□ 0.01
TMEM248-204ENST00000424964 IL1BP01584 269 aa15.1■□□□□ 0.01
TMEM248-204ENST00000424964 NBL1P41271 181 aa15.1■□□□□ 0.01
TMEM248-204ENST00000424964 MARCKSL1P49006 195 aa15.1■□□□□ 0.01
TMEM248-204ENST00000424964 ELAVL3Q14576 367 aaKnown RBP15.1■□□□□ 0.01
TMEM248-204ENST00000424964 PAFAH1B3Q15102 231 aaKnown RBP15.1■□□□□ 0.01
TMEM248-204ENST00000424964 NCBP2-AS2Q69YL0 99 aa15.1■□□□□ 0.01
TMEM248-204ENST00000424964 MFSD7Q6UXD7 560 aa15.1■□□□□ 0.01
TMEM248-204ENST00000424964 ARHGAP36Q6ZRI8 547 aa15.1■□□□□ 0.01
TMEM248-204ENST00000424964 DSG4Q86SJ6 1040 aa15.1■□□□□ 0.01
TMEM248-204ENST00000424964 METTL3Q86U44 580 aaKnown RBP15.1■□□□□ 0.01
TMEM248-204ENST00000424964 RFX6Q8HWS3 928 aa15.1■□□□□ 0.01
TMEM248-204ENST00000424964 CCDC50Q8IVM0 306 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms