RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 VN1R2Q8NFZ6 395 aa15.33■□□□□ 0.04
CALD1-206ENST00000424922 CCT6BQ92526 530 aa15.33■□□□□ 0.04
CALD1-206ENST00000424922 MRPL38Q96DV4 380 aaKnown RBP15.33■□□□□ 0.04
CALD1-206ENST00000424922 SLC39A8Q9C0K1 460 aa15.33■□□□□ 0.04
CALD1-206ENST00000424922 PIDD1Q9HB75 910 aa15.33■□□□□ 0.04
CALD1-206ENST00000424922 NKIRAS1Q9NYS0 192 aa15.33■□□□□ 0.04
CALD1-206ENST00000424922 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.33■□□□□ 0.04
CALD1-206ENST00000424922 KCNK1O00180 336 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 PHBP35232 272 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 IFNAR2P48551 515 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 MPP2Q14168 576 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 FASTKD3Q14CZ7 662 aaKnown RBP15.32■□□□□ 0.04
CALD1-206ENST00000424922 ARHGAP15Q53QZ3 475 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 TMC5Q6UXY8 1006 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 ARHGAP36Q6ZRI8 547 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 ZBED8Q8IZ13 594 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 ATP11CQ8NB49 1132 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 LEMD2Q8NC56 503 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 HDAC11Q96DB2 347 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 FERMT1Q9BQL6 677 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 CEP41Q9BYV8 373 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 NOL6Q9H6R4 1146 aaKnown RBP15.32■□□□□ 0.04
CALD1-206ENST00000424922 VPS37BQ9H9H4 285 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 PAK5Q9P286 719 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 ZFP37Q9Y6Q3 630 aaPredicted RBP15.32■□□□□ 0.04
CALD1-206ENST00000424922 CCT8L1PA6NM43 557 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 RASA4BC9J798 803 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 RNF103O00237 685 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 PRPF4O43172 522 aaKnown RBP eCLIP15.32■□□□□ 0.043e-7■■■■□ 23.9
CALD1-206ENST00000424922 RASA4O43374 803 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 GREM1O60565 184 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 TSPAN3O60637 253 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 GCATO75600 419 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 PFKLP17858 780 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 RPS24P62847 133 aaKnown RBP15.32■□□□□ 0.04
CALD1-206ENST00000424922 BASP1P80723 227 aaKnown RBP15.32■□□□□ 0.04
CALD1-206ENST00000424922 TMED2Q15363 201 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 C5orf22Q49AR2 442 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 PRSS36Q5K4E3 855 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 AFMIDQ63HM1 303 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 CHRDL2Q6WN34 429 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 SRRM1Q8IYB3 904 aaKnown RBP15.32■□□□□ 0.04
CALD1-206ENST00000424922 CMTM8Q8IZV2 173 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 UMODL1-AS1Q8N2C9 162 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 SMG7Q92540 1137 aaKnown RBP15.32■□□□□ 0.04
CALD1-206ENST00000424922 MAGEB18Q96M61 343 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 BRD8Q9H0E9 1235 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 CFAP97Q9P2B7 532 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 TBK1Q9UHD2 729 aa15.32■□□□□ 0.04
CALD1-206ENST00000424922 C5orf42Q9H799 3197 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 FAM47DPA6NHR8 397 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 SNX3O60493 162 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 OR1E1P30953 314 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 AVPR1AP37288 418 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 SGSHP51688 502 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 KCNC3Q14003 757 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 RABGAP1LQ5R372 815 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 Q6ZNB5 142 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 ATPAF2Q8N5M1 289 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 PRICKLE1Q96MT3 831 aaPredicted RBP15.31■□□□□ 0.04
CALD1-206ENST00000424922 CXorf56Q9H5V9 222 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 TASP1Q9H6P5 420 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 SSU72Q9NP77 194 aaKnown RBP15.31■□□□□ 0.04
CALD1-206ENST00000424922 RAB6BQ9NRW1 208 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 ZNF212Q9UDV6 495 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 STOML2Q9UJZ1 356 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 LSM7Q9UK45 103 aaKnown RBP15.31■□□□□ 0.04
CALD1-206ENST00000424922 SMG5Q9UPR3 1016 aaKnown RBP15.31■□□□□ 0.04
CALD1-206ENST00000424922 CAPN7Q9Y6W3 813 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 A0A0A0MRY4 1105 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 STK10O94804 968 aaKnown RBP15.31■□□□□ 0.04
CALD1-206ENST00000424922 POU2F2P09086 479 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 DDX6P26196 483 aaKnown RBP eCLIP15.31■□□□□ 0.04
CALD1-206ENST00000424922 STX2P32856 288 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 PAPOLAP51003 745 aaKnown RBP15.31■□□□□ 0.04
CALD1-206ENST00000424922 GPX6P59796 221 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 WASHC5Q12768 1159 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 ANKRD20A2Q5SQ80 823 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 SYCP2LQ5T4T6 812 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 FAXCQ5TGI0 409 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 ANKRD20A1Q5TYW2 823 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 ANKRD20A3Q5VUR7 823 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 ANKRD22Q5VYY1 191 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 ANKRD42Q8N9B4 389 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 PYROXD1Q8WU10 500 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 ING5Q8WYH8 240 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 SPATA13Q96N96 652 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 CDCA3Q99618 268 aaPredicted RBP15.31■□□□□ 0.04
CALD1-206ENST00000424922 DDX50Q9BQ39 737 aaKnown RBP15.31■□□□□ 0.04
CALD1-206ENST00000424922 ELAC2Q9BQ52 826 aaKnown RBP15.31■□□□□ 0.04
CALD1-206ENST00000424922 FRMD8Q9BZ67 464 aaPredicted RBP15.31■□□□□ 0.04
CALD1-206ENST00000424922 PSMC3IPQ9P2W1 217 aaPredicted RBP15.31■□□□□ 0.04
CALD1-206ENST00000424922 CCL26Q9Y258 94 aa15.31■□□□□ 0.04
CALD1-206ENST00000424922 NUP210Q8TEM1 1887 aaPredicted RBP15.3■□□□□ 0.04
CALD1-206ENST00000424922 TRIOBPQ9H2D6 2365 aa15.3■□□□□ 0.04
CALD1-206ENST00000424922 LEFTY2O00292 366 aa15.3■□□□□ 0.04
CALD1-206ENST00000424922 LATS1O95835 1130 aa15.3■□□□□ 0.04
CALD1-206ENST00000424922 GSTA1P08263 222 aa15.3■□□□□ 0.04
CALD1-206ENST00000424922 NDST2P52849 883 aa15.3■□□□□ 0.04
CALD1-206ENST00000424922 LRRC14Q15048 493 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms