RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 PAGE1O75459 146 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 DAB1O75553 588 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 ADCY5O95622 1261 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 LSM8O95777 96 aaKnown RBP13.31□□□□□ -0.28
VRK3-203ENST00000424804 IL1BP01584 269 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 CHRNB2P17787 502 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 CXCR3P49682 368 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 SULT1E1P49888 294 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 C21orf59P57076 290 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 NOMO3P69849 1222 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 FANCCQ00597 558 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 SULT2A1Q06520 285 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 CNTN1Q12860 1018 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 SFSWAPQ12872 951 aaKnown RBP13.31□□□□□ -0.28
VRK3-203ENST00000424804 DNAJC3Q13217 504 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 DLG2Q15700 870 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 ALFQ53S48 1182 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 TTC39BQ5VTQ0 682 aaPredicted RBP13.31□□□□□ -0.28
VRK3-203ENST00000424804 TRNP1Q6NT89 227 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 SLC26A9Q7LBE3 791 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 BNIPLQ7Z465 357 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 ADAT2Q7Z6V5 191 aaKnown RBP13.31□□□□□ -0.28
VRK3-203ENST00000424804 ZNF677Q86XU0 584 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 GALNT15Q8N3T1 639 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 SH2D3CQ8N5H7 860 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 SLC30A5Q8TAD4 765 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 SERAC1Q96JX3 654 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 NPY6RQ99463 290 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 C11orf70Q9BRQ4 267 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 KDM4CQ9H3R0 1056 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 ERVMER34-1Q9H9K5 563 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 TMPRSS4Q9NRS4 437 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 PIGVQ9NUD9 493 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 ARHGEF38Q9NXL2 777 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 ZNF212Q9UDV6 495 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 SLC12A6Q9UHW9 1150 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 NOCTQ9UK39 431 aaKnown RBP13.31□□□□□ -0.28
VRK3-203ENST00000424804 VANGL2Q9ULK5 521 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 PCDHGA1Q9Y5H4 931 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 SNX10Q9Y5X0 201 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 TDRD6O60522 2096 aaKnown RBP13.31□□□□□ -0.28
VRK3-203ENST00000424804 CHD5Q8TDI0 1954 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 TBC1D3DA0A087WVF3 549 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 TBC1D3IA0A087WXS9 549 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 TBC1D3EA0A087X179 549 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 TBC1D3KA0A087X1G2 549 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 TBC1D3FA6NER0 549 aaPredicted RBP13.3□□□□□ -0.28
VRK3-203ENST00000424804 DRGXA6NNA5 263 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 TBC1D3LB9A6J9 549 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 M0QYT0 321 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 ENC1O14682 589 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 TBC1D3HP0C7X1 549 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 SLC2A3P11169 496 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 SRCP12931 536 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 FERP16591 822 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 ABCB4P21439 1286 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 EPHA8P29322 1005 aaPredicted RBP13.3□□□□□ -0.28
VRK3-203ENST00000424804 CDH5P33151 784 aaPredicted RBP13.3□□□□□ -0.28
VRK3-203ENST00000424804 NOS2P35228 1153 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 GABRB2P47870 512 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 ACADVLP49748 655 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 FMO1Q01740 532 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 RABGAP1LQ5R372 815 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 TBC1D3GQ6DHY5 549 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 TBC1D3CQ6IPX1 549 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 NAPEPLDQ6IQ20 393 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 PDZD3Q86UT5 571 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 TRIM69Q86WT6 500 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 ZDHHC17Q8IUH5 632 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 CCDC117Q8IWD4 279 aaPredicted RBP13.3□□□□□ -0.28
VRK3-203ENST00000424804 TBC1D3Q8IZP1 549 aaPredicted RBP13.3□□□□□ -0.28
VRK3-203ENST00000424804 MFSD2AQ8NA29 543 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 PIP4K2CQ8TBX8 421 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 HNRNPLLQ8WVV9 542 aaKnown RBP13.3□□□□□ -0.28
VRK3-203ENST00000424804 PGAP3Q96FM1 320 aaPredicted RBP13.3□□□□□ -0.28
VRK3-203ENST00000424804 RPRD1AQ96P16 312 aaPredicted RBP13.3□□□□□ -0.28
VRK3-203ENST00000424804 BBC3Q96PG8 261 aaPredicted RBP13.3□□□□□ -0.28
VRK3-203ENST00000424804 AASDHPPTQ9NRN7 309 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.3□□□□□ -0.28
VRK3-203ENST00000424804 FTSJ1Q9UET6 329 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 CA5BQ9Y2D0 317 aa13.3□□□□□ -0.28
VRK3-203ENST00000424804 A0A1B0GTH6 734 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 LRRC53A6NM62 1247 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 K7ERQ8 282 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 ALOX15BO15296 676 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 SLC7A4O43246 635 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 SMAD6O43541 496 aaKnown RBP13.29□□□□□ -0.28
VRK3-203ENST00000424804 SNAP91O60641 907 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 CLDN11O75508 207 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 ZNF821O75541 412 aaPredicted RBP13.29□□□□□ -0.28
VRK3-203ENST00000424804 LDOC1O95751 146 aaPredicted RBP13.29□□□□□ -0.28
VRK3-203ENST00000424804 CCDC172P0C7W6 258 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 NSFP46459 744 aaKnown RBP13.29□□□□□ -0.28
VRK3-203ENST00000424804 UBASH3AP57075 661 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 NFKBIBQ15653 356 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 ASIC2Q16515 512 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 PIP5KL1Q5T9C9 394 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 RNF219Q5W0B1 726 aaPredicted RBP13.29□□□□□ -0.28
VRK3-203ENST00000424804 FBXL19Q6PCT2 694 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 TRIM72Q6ZMU5 477 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms