RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 NDFIP2Q9NV92 336 aa19.11■□□□□ 0.65
PRNP-202ENST00000424424 FBXL12Q9NXK8 326 aa19.11■□□□□ 0.65
PRNP-202ENST00000424424 PILRBQ9UKJ0 227 aa19.11■□□□□ 0.65
PRNP-202ENST00000424424 NEU3Q9UQ49 428 aa19.11■□□□□ 0.65
PRNP-202ENST00000424424 WASH4PA8MWX3 477 aa19.1■□□□□ 0.65
PRNP-202ENST00000424424 C1QTNF3-AMACRE9PGA6 284 aa19.1■□□□□ 0.65
PRNP-202ENST00000424424 EEF2KO00418 725 aaKnown RBP19.1■□□□□ 0.65
PRNP-202ENST00000424424 MCF2LO15068 1137 aa19.1■□□□□ 0.65
PRNP-202ENST00000424424 DAPK3O43293 454 aa19.1■□□□□ 0.65
PRNP-202ENST00000424424 MT-CO1P00395 513 aa19.1■□□□□ 0.65
PRNP-202ENST00000424424 GLDCP23378 1020 aa19.1■□□□□ 0.65
PRNP-202ENST00000424424 RECQLP46063 649 aaPredicted RBP19.1■□□□□ 0.65
PRNP-202ENST00000424424 ID4P47928 161 aa19.1■□□□□ 0.65
PRNP-202ENST00000424424 ZNF135P52742 658 aaPredicted RBP19.1■□□□□ 0.65
PRNP-202ENST00000424424 YBEYP58557 167 aaPredicted RBP19.1■□□□□ 0.65
PRNP-202ENST00000424424 TBX2Q13207 712 aaPredicted RBP19.1■□□□□ 0.65
PRNP-202ENST00000424424 SEMA3BQ13214 749 aa19.1■□□□□ 0.65
PRNP-202ENST00000424424 DUOXA1Q1HG43 343 aa19.1■□□□□ 0.65
PRNP-202ENST00000424424 BOLA3Q53S33 107 aa19.1■□□□□ 0.65
PRNP-202ENST00000424424 Q6ZVU0 165 aa19.1■□□□□ 0.65
PRNP-202ENST00000424424 NETO1Q8TDF5 533 aa19.1■□□□□ 0.65
PRNP-202ENST00000424424 NUSAP1Q9BXS6 441 aaKnown RBP19.1■□□□□ 0.65
PRNP-202ENST00000424424 NHEJ1Q9H9Q4 299 aaPredicted RBP19.1■□□□□ 0.65
PRNP-202ENST00000424424 GPATCH2LQ9NWQ4 482 aa19.1■□□□□ 0.65
PRNP-202ENST00000424424 SUSD2Q9UGT4 822 aa19.1■□□□□ 0.65
PRNP-202ENST00000424424 CDV3Q9UKY7 258 aaKnown RBP19.1■□□□□ 0.65
PRNP-202ENST00000424424 NENFQ9UMX5 172 aa19.1■□□□□ 0.65
PRNP-202ENST00000424424 FRYLO94915 3013 aa19.1■□□□□ 0.65
PRNP-202ENST00000424424 PI4KAP42356 2102 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 ATXN2Q99700 1313 aaKnown RBP19.09■□□□□ 0.65
PRNP-202ENST00000424424 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.09■□□□□ 0.65
PRNP-202ENST00000424424 A0A1W2PP55 124 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 METTL12A8MUP2 240 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 RNASEH2AO75792 299 aaKnown RBP19.09■□□□□ 0.65
PRNP-202ENST00000424424 ZMPSTE24O75844 475 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 SEMA4FO95754 770 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 GNSP15586 552 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 ACSL1P33121 698 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 ACVRL1P37023 503 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 SERPINH1P50454 418 aaKnown RBP19.09■□□□□ 0.65
PRNP-202ENST00000424424 ARF5P84085 180 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 RSPO4Q2I0M5 234 aaPredicted RBP19.09■□□□□ 0.65
PRNP-202ENST00000424424 ASTE1Q2TB18 679 aaPredicted RBP19.09■□□□□ 0.65
PRNP-202ENST00000424424 TRIM61Q5EBN2 209 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 DCAF12L1Q5VU92 463 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 PEAR1Q5VY43 1037 aaPredicted RBP19.09■□□□□ 0.65
PRNP-202ENST00000424424 HDDC3Q8N4P3 179 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 NIPA2Q8N8Q9 360 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 ZNF564Q8TBZ8 553 aaPredicted RBP19.09■□□□□ 0.65
PRNP-202ENST00000424424 ARHGEF26Q96DR7 871 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 PEBP4Q96S96 227 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 CHP1Q99653 195 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 ANP32EQ9BTT0 268 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 CEP44Q9C0F1 390 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 TMEM74BQ9NUR3 256 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 CTTNBP2NLQ9P2B4 639 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 UVRAGQ9P2Y5 699 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 EVLQ9UI08 416 aaPredicted RBP19.09■□□□□ 0.65
PRNP-202ENST00000424424 LCMT1Q9UIC8 334 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 FZD4Q9ULV1 537 aa19.09■□□□□ 0.65
PRNP-202ENST00000424424 SPTBN4Q9H254 2564 aa19.08■□□□□ 0.65
PRNP-202ENST00000424424 ZNF292O60281 2723 aa19.08■□□□□ 0.65
PRNP-202ENST00000424424 ZSCAN5CA6NGD5 496 aaPredicted RBP19.08■□□□□ 0.64
PRNP-202ENST00000424424 K7ERQ8 282 aa19.08■□□□□ 0.64
PRNP-202ENST00000424424 GOT1P17174 413 aa19.08■□□□□ 0.64
PRNP-202ENST00000424424 PARP15Q460N3 678 aa19.08■□□□□ 0.64
PRNP-202ENST00000424424 PPP6R3Q5H9R7 873 aaPredicted RBP19.08■□□□□ 0.64
PRNP-202ENST00000424424 TCEAL6Q6IPX3 200 aa19.08■□□□□ 0.64
PRNP-202ENST00000424424 C22orf39Q6P5X5 142 aa19.08■□□□□ 0.64
PRNP-202ENST00000424424 SLC23A3Q6PIS1 610 aa19.08■□□□□ 0.64
PRNP-202ENST00000424424 PCDH20Q8N6Y1 951 aaKnown RBP19.08■□□□□ 0.64
PRNP-202ENST00000424424 TCEAL3Q969E4 200 aa19.08■□□□□ 0.64
PRNP-202ENST00000424424 MRFAP1L1Q96HT8 127 aa19.08■□□□□ 0.64
PRNP-202ENST00000424424 ZWILCHQ9H900 591 aa19.08■□□□□ 0.64
PRNP-202ENST00000424424 LRRC72A6NJI9 287 aa19.07■□□□□ 0.64
PRNP-202ENST00000424424 PATE3B3GLJ2 98 aa19.07■□□□□ 0.64
PRNP-202ENST00000424424 SMAD6O43541 496 aaKnown RBP19.07■□□□□ 0.64
PRNP-202ENST00000424424 KDELR3O43731 214 aa19.07■□□□□ 0.64
PRNP-202ENST00000424424 CFIP05156 583 aa19.07■□□□□ 0.64
PRNP-202ENST00000424424 ARL4AP40617 200 aa19.07■□□□□ 0.64
PRNP-202ENST00000424424 SSR1P43307 286 aaKnown RBP19.07■□□□□ 0.64
PRNP-202ENST00000424424 ZNF75DP51815 510 aa19.07■□□□□ 0.64
PRNP-202ENST00000424424 CCDC15Q0P6D6 951 aa19.07■□□□□ 0.64
PRNP-202ENST00000424424 PUM1Q14671 1186 aaKnown RBP eCLIP19.07■□□□□ 0.64
PRNP-202ENST00000424424 CA9Q16790 459 aa19.07■□□□□ 0.64
PRNP-202ENST00000424424 HADHQ16836 314 aaKnown RBP19.07■□□□□ 0.64
PRNP-202ENST00000424424 UMODL1-AS1Q8N2C9 162 aa19.07■□□□□ 0.64
PRNP-202ENST00000424424 OR2A12Q8NGT7 310 aa19.07■□□□□ 0.64
PRNP-202ENST00000424424 PIP4K2CQ8TBX8 421 aa19.07■□□□□ 0.64
PRNP-202ENST00000424424 DNASE2BQ8WZ79 361 aa19.07■□□□□ 0.64
PRNP-202ENST00000424424 BTBD6Q96KE9 485 aa19.07■□□□□ 0.64
PRNP-202ENST00000424424 KCTD15Q96SI1 283 aaPredicted RBP19.07■□□□□ 0.64
PRNP-202ENST00000424424 NEUROG2Q9H2A3 272 aa19.07■□□□□ 0.64
PRNP-202ENST00000424424 PPM1HQ9ULR3 514 aa19.07■□□□□ 0.64
PRNP-202ENST00000424424 SLC6A14Q9UN76 642 aa19.07■□□□□ 0.64
PRNP-202ENST00000424424 GVINP1Q7Z2Y8 2422 aa19.07■□□□□ 0.64
PRNP-202ENST00000424424 NUMA1Q14980 2115 aa19.07■□□□□ 0.64
PRNP-202ENST00000424424 FAM47DPA6NHR8 397 aa19.06■□□□□ 0.64
PRNP-202ENST00000424424 RASA4BC9J798 803 aa19.06■□□□□ 0.64
PRNP-202ENST00000424424 H3BRJ5 948 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms