RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 BIRC8Q96P09 236 aa15.48■□□□□ 0.07
C9orf3-204ENST00000424143 FTHL17Q9BXU8 183 aa15.48■□□□□ 0.07
C9orf3-204ENST00000424143 SHCBP1LQ9BZQ2 653 aa15.48■□□□□ 0.07
C9orf3-204ENST00000424143 MAN1C1Q9NR34 630 aa15.48■□□□□ 0.07
C9orf3-204ENST00000424143 IPO11Q9UI26 975 aaKnown RBP15.48■□□□□ 0.07
C9orf3-204ENST00000424143 MFHAS1Q9Y4C4 1052 aa15.48■□□□□ 0.07
C9orf3-204ENST00000424143 AK5Q9Y6K8 562 aa15.48■□□□□ 0.07
C9orf3-204ENST00000424143 LTBP3Q9NS15 1303 aa15.48■□□□□ 0.07
C9orf3-204ENST00000424143 MYO18AQ92614 2054 aaKnown RBP15.48■□□□□ 0.07
C9orf3-204ENST00000424143 TRIM64CA6NLI5 447 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 C9IYK1 514 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 ZNF701M0R085 212 aaPredicted RBP15.47■□□□□ 0.07
C9orf3-204ENST00000424143 ZMPSTE24O75844 475 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 PGM3O95394 542 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 PIGNO95427 931 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 CD4P01730 458 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 SBK3P0C264 359 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 ETS2P15036 469 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 MPSTP25325 297 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 SCN1AP35498 2009 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 PNPLA4P41247 253 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 SULT1E1P49888 294 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 TKTL1P51854 596 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 KPNA2P52292 529 aaKnown RBP15.47■□□□□ 0.07
C9orf3-204ENST00000424143 ATXN1P54253 815 aaKnown RBP15.47■□□□□ 0.07
C9orf3-204ENST00000424143 GJA9P57773 515 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 MRPS22P82650 360 aaKnown RBP15.47■□□□□ 0.07
C9orf3-204ENST00000424143 HPCAP84074 193 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 MS4A2Q01362 244 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 SULT2A1Q06520 285 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 STX5Q13190 355 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 PSMD5Q16401 504 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 ARL13AQ5H913 290 aaPredicted RBP15.47■□□□□ 0.07
C9orf3-204ENST00000424143 OTUD1Q5VV17 481 aaPredicted RBP15.47■□□□□ 0.07
C9orf3-204ENST00000424143 DHRS4L2Q6PKH6 230 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 ALKAL1Q6UXT8 129 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 PIWIL4Q7Z3Z4 852 aaKnown RBP15.47■□□□□ 0.07
C9orf3-204ENST00000424143 LINC00523Q86TU6 105 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 ERI1Q8IV48 349 aaKnown RBP15.47■□□□□ 0.07
C9orf3-204ENST00000424143 DEFB106AQ8N104 65 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 GOLM1Q8NBJ4 401 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 MIPOL1Q8TD10 442 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 PTCD2Q8WV60 388 aaKnown RBP15.47■□□□□ 0.07
C9orf3-204ENST00000424143 RCN3Q96D15 328 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 HDAC11Q96DB2 347 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 CPB2Q96IY4 423 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 PKP2Q99959 881 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 OXCT2Q9BYC2 517 aaPredicted RBP15.47■□□□□ 0.07
C9orf3-204ENST00000424143 UNC93B1Q9H1C4 597 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 FAM49BQ9NUQ9 324 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 TUBA8Q9NY65 449 aaPredicted RBP15.47■□□□□ 0.07
C9orf3-204ENST00000424143 PIM2Q9P1W9 311 aa15.47■□□□□ 0.07
C9orf3-204ENST00000424143 KLHL8Q9P2G9 620 aaPredicted RBP15.47■□□□□ 0.07
C9orf3-204ENST00000424143 EEF2KO00418 725 aaKnown RBP15.46■□□□□ 0.07
C9orf3-204ENST00000424143 PIRO00625 290 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 LTFP02788 710 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 PSMC3P17980 439 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 RHDQ02161 417 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 GALNT1Q10472 559 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-204ENST00000424143 ILF2Q12905 390 aaKnown RBP15.46■□□□□ 0.07
C9orf3-204ENST00000424143 TRIM25Q14258 630 aaKnown RBP15.46■□□□□ 0.07
C9orf3-204ENST00000424143 KIZQ2M2Z5 673 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 MGAT5BQ3V5L5 792 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 C9orf57Q5W0N0 161 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 MAMDC4Q6UXC1 1216 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 ZC3HC1Q86WB0 502 aaKnown RBP15.46■□□□□ 0.07
C9orf3-204ENST00000424143 CROCCP3Q8IVE0 287 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 LSMEM2Q8N112 164 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 NUP93Q8N1F7 819 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 PYROXD2Q8N2H3 581 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 LRRC43Q8N309 656 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 PACRGLQ8N7B6 248 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 C7orf31Q8N865 590 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 KDM1BQ8NB78 822 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 BHLHE22Q8NFJ8 381 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-204ENST00000424143 OR6B3Q8NGW1 331 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 CEP70Q8NHQ1 597 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 NLRP7Q8WX94 980 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 WNT8BQ93098 351 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 EMID1Q96A84 441 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-204ENST00000424143 PGAP3Q96FM1 320 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-204ENST00000424143 TSGA13Q96PP4 275 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 PPP1R2P1Q96PQ5 205 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 HNRNPABQ99729 332 aaKnown RBP15.46■□□□□ 0.07
C9orf3-204ENST00000424143 SNX25Q9H3E2 840 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 C8orf4Q9NR00 106 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 RRN3Q9NYV6 651 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 CEPT1Q9Y6K0 416 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 TSC2P49815 1807 aa15.46■□□□□ 0.07
C9orf3-204ENST00000424143 CNMDO75829 334 aa15.46■□□□□ 0.06
C9orf3-204ENST00000424143 CDK9P50750 372 aaKnown RBP15.46■□□□□ 0.06
C9orf3-204ENST00000424143 ATP4BP51164 291 aa15.46■□□□□ 0.06
C9orf3-204ENST00000424143 RAB15P59190 212 aa15.46■□□□□ 0.06
C9orf3-204ENST00000424143 DCTN2Q13561 401 aaKnown RBP15.46■□□□□ 0.06
C9orf3-204ENST00000424143 PEX6Q13608 980 aa15.46■□□□□ 0.06
C9orf3-204ENST00000424143 SPATS1Q496A3 300 aa15.46■□□□□ 0.06
C9orf3-204ENST00000424143 CARM1Q86X55 608 aa15.46■□□□□ 0.06
C9orf3-204ENST00000424143 PELI3Q8N2H9 469 aa15.46■□□□□ 0.06
C9orf3-204ENST00000424143 TMEM130Q8N3G9 435 aa15.46■□□□□ 0.06
C9orf3-204ENST00000424143 CCNYQ8ND76 341 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms