RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 SEC62Q99442 399 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 TIMP4Q99727 224 aa3□□□□□ -1.93
PMS1-209ENST00000424059 ZSWIM1Q9BR11 485 aa3□□□□□ -1.93
PMS1-209ENST00000424059 JPH2Q9BR39 696 aaPredicted RBP3□□□□□ -1.93
PMS1-209ENST00000424059 ERP44Q9BS26 406 aa3□□□□□ -1.93
PMS1-209ENST00000424059 API5Q9BZZ5 524 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 FAM107BQ9H098 131 aa3□□□□□ -1.93
PMS1-209ENST00000424059 XRN2Q9H0D6 950 aaKnown RBP eCLIP3□□□□□ -1.93
PMS1-209ENST00000424059 RAD21L1Q9H4I0 556 aa3□□□□□ -1.93
PMS1-209ENST00000424059 UNKLQ9H9P5 680 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 LY9Q9HBG7 655 aa3□□□□□ -1.93
PMS1-209ENST00000424059 CCDC177Q9NQR7 707 aaPredicted RBP3□□□□□ -1.93
PMS1-209ENST00000424059 C8orf4Q9NR00 106 aa3□□□□□ -1.93
PMS1-209ENST00000424059 VPS45Q9NRW7 570 aa3□□□□□ -1.93
PMS1-209ENST00000424059 INIPQ9NRY2 104 aa3□□□□□ -1.93
PMS1-209ENST00000424059 TRMT13Q9NUP7 481 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 IL37Q9NZH6 218 aa3□□□□□ -1.93
PMS1-209ENST00000424059 TMCO1Q9UM00 188 aa3□□□□□ -1.93
PMS1-209ENST00000424059 ABCC11Q96J66 1382 aa3□□□□□ -1.93
PMS1-209ENST00000424059 SCAPERQ9BY12 1400 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 A0A0B4J269 797 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 MAGEB16A2A368 324 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 RGSL1A5PLK6 1076 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.99□□□□□ -1.93
PMS1-209ENST00000424059 TARM1B6A8C7 271 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 GOLGA8SH3BPF8 625 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 NEMP1O14524 444 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 APOL1O14791 398 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 MAGEB3O15480 346 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 PROM1O43490 865 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 KLHL2O95198 593 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 CHRNA1P02708 482 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 S100A9P06702 114 aaKnown RBP2.99□□□□□ -1.93
PMS1-209ENST00000424059 APOA4P06727 396 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 ADRB2P07550 413 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 MYL4P12829 197 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 GAP43P17677 238 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 TBXAS1P24557 533 aaPredicted RBP2.99□□□□□ -1.93
PMS1-209ENST00000424059 GDI1P31150 447 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 ACSL1P33121 698 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 LIFRP42702 1097 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 ALDH1A3P47895 512 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 DIO1P49895 249 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 ALDH18A1P54886 795 aaKnown RBP2.99□□□□□ -1.93
PMS1-209ENST00000424059 VCPP55072 806 aaKnown RBP2.99□□□□□ -1.93
PMS1-209ENST00000424059 DCAF7P61962 342 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 TMPRSS15P98073 1019 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 C17orf67Q0P5P2 114 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 MALLQ13021 153 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 KRT32Q14532 448 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 MYLK3Q32MK0 819 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 MINDY4Q4G0A6 757 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 XKR9Q5GH70 373 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 TBC1D9BQ66K14 1250 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 KIAA0895LQ68EN5 471 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 PDPK2PQ6A1A2 396 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 ZNF529Q6P280 563 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 SHQ1Q6PI26 577 aaKnown RBP2.99□□□□□ -1.93
PMS1-209ENST00000424059 KRT74Q7RTS7 529 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 SLC51BQ86UW2 128 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 GLCCI1Q86VQ1 547 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 KIAA0319LQ8IZA0 1049 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 ZNF397Q8NF99 534 aaPredicted RBP2.99□□□□□ -1.93
PMS1-209ENST00000424059 NLGN4YQ8NFZ3 816 aaPredicted RBP2.99□□□□□ -1.93
PMS1-209ENST00000424059 MOSPD2Q8NHP6 518 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 MYCBPAPQ8TBZ2 947 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 SPPL3Q8TCT6 385 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.99□□□□□ -1.93
PMS1-209ENST00000424059 SSH1Q8WYL5 1049 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 CCT6BQ92526 530 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 KAT2BQ92831 832 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 OPTNQ96CV9 577 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 SUCLG2Q96I99 432 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 UBXN10Q96LJ8 280 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 TSG101Q99816 390 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 C9orf16Q9BUW7 83 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 C1QTNF7Q9BXJ2 289 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 NUSAP1Q9BXS6 441 aaKnown RBP2.99□□□□□ -1.93
PMS1-209ENST00000424059 TXLNGYQ9BZA5 131 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 GCOM2Q9BZD3 368 aaPredicted RBP2.99□□□□□ -1.93
PMS1-209ENST00000424059 WDR12Q9GZL7 423 aaKnown RBP2.99□□□□□ -1.93
PMS1-209ENST00000424059 DRC3Q9H069 523 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 SIL1Q9H173 461 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 TFB2MQ9H5Q4 396 aaKnown RBP2.99□□□□□ -1.93
PMS1-209ENST00000424059 MRM3Q9HC36 420 aaKnown RBP2.99□□□□□ -1.93
PMS1-209ENST00000424059 C1orf112Q9NSG2 853 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 ANO10Q9NW15 660 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 ASNSD1Q9NWL6 643 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 NSMCE4AQ9NXX6 385 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 ATXN10Q9UBB4 475 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 ARPP21Q9UBL0 812 aaPredicted RBP2.99□□□□□ -1.93
PMS1-209ENST00000424059 CIDEBQ9UHD4 219 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 SIK3Q9Y2K2 1263 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 SH3GLB1Q9Y371 365 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 AP1M2Q9Y6Q5 423 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.99□□□□□ -1.93
PMS1-209ENST00000424059 SALL3Q9BXA9 1300 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 KIAA1107Q9UPP5 1409 aa2.99□□□□□ -1.93
PMS1-209ENST00000424059 TRGV11A0A075B6L2 103 aa2.98□□□□□ -1.93
PMS1-209ENST00000424059 A0A1W2PQ67 120 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms