RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 SAMSN1Q9NSI8 373 aaKnown RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 UCKL1Q9NWZ5 548 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 MTMR4Q9NYA4 1195 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 UBAP1Q9NZ09 502 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 PCDHGC3Q9UN70 934 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 ENPP3O14638 875 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 SMPD2O60906 423 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 TM7SF2O76062 418 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 TBXAS1P24557 533 aaPredicted RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 POU1F1P28069 291 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 KCNA1Q09470 495 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 ZNF311Q5JNZ3 666 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 ISM2Q6H9L7 571 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 PACS1Q6VY07 963 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 PLPPR4Q7Z2D5 763 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 ANKRD33Q7Z3H0 272 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 GALNT7Q86SF2 657 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 KCTD17Q8N5Z5 321 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 GLIS1Q8NBF1 620 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 NPLOC4Q8TAT6 608 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 OTUB1Q96FW1 271 aaPredicted RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 IGSF21Q96ID5 467 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 RMDN2Q96LZ7 410 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 C16orf45Q96MC5 204 aaPredicted RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 SYT15Q9BQS2 421 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 SH2D3AQ9BRG2 576 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 TRIM9Q9C026 710 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 ACBD3Q9H3P7 528 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 RC3H2Q9HBD1 1191 aaKnown RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 DYNLRB1Q9NP97 96 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 PAK6Q9NQU5 681 aaPredicted RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 DDX43Q9NXZ2 648 aaKnown RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 R3HDM2Q9Y2K5 976 aaKnown RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 DYRK1BQ9Y463 629 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 SPEF1Q9Y4P9 236 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 PCDHA2Q9Y5H9 948 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 PMF1-BGLAPU3KQ54 211 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 MAP1BP46821 2468 aaKnown RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 HEATR9A2RTY3 570 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 BLACEA4D250 179 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 LRRC53A6NM62 1247 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 HYAL3O43820 417 aaPredicted RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 CSO75390 466 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ECI2O75521 394 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 TRAPPC6AO75865 159 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 GUCA1CO95843 209 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 C8BP07358 591 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 HEXBP07686 556 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 SLC35G4P0C7Q5 338 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 MCF2P10911 925 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 CSRP1P21291 193 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 DRD4P21917 467 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 RXRGP48443 463 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 TMED10P49755 219 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 TBX4P57082 545 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 CHRNB3Q05901 458 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 IL10RAQ13651 578 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 CLCA4Q14CN2 919 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 CRY2Q49AN0 593 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 NXNQ6DKJ4 435 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 BHLHB9Q6PI77 547 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 UGT2A3Q6UWM9 527 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 SNX32Q86XE0 403 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 CCDC116Q8IYX3 515 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 FAM26EQ8N5C1 309 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 SH3RF2Q8TEC5 729 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 C18orf8Q96DM3 657 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 AK8Q96MA6 479 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 TEX12Q9BXU0 123 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 DPH1Q9BZG8 443 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ATG10Q9H0Y0 220 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 UPF3AQ9H1J1 476 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 VPS16Q9H269 839 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 NEUROG2Q9H2A3 272 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ATP13A2Q9NQ11 1180 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 RAB20Q9NX57 234 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 RPS6KB2Q9UBS0 482 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 LCMT1Q9UIC8 334 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 KIAA1217Q5T5P2 1943 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 SPAARA0A1B0GVQ0 90 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 A0A1W2PRU2 124 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ANKRD33BA6NCL7 494 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 OR5K4A6NMS3 321 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 YDJCA8MPS7 323 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 H3BMM5 538 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 CBX4O00257 560 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 DFFAO00273 331 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 E2F3O00716 465 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 TBL1XO60907 577 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ENDOD1O94919 500 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 IMPDH2P12268 514 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 IRF2P14316 349 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ENGP17813 658 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 KPNA2P52292 529 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ZBTB16Q05516 673 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 BCL2L1Q07817 233 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ORC2Q13416 577 aaPredicted RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 PDCD2Q16342 344 aaPredicted RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 CAMK4Q16566 473 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 UBE2SQ16763 222 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms