RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 ATF7P17544 494 aaPredicted RBP6.96□□□□□ -1.29
CNOT4-205ENST00000423368 POU3F3P20264 500 aaPredicted RBP6.96□□□□□ -1.29
CNOT4-205ENST00000423368 ELK4P28324 431 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 NMT1P30419 496 aaKnown RBP6.96□□□□□ -1.29
CNOT4-205ENST00000423368 ADD2P35612 726 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 CCT3P49368 545 aaKnown RBP6.96□□□□□ -1.29
CNOT4-205ENST00000423368 ARHGDIBP52566 201 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 ERVK-21P61565 698 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 FKBP3Q00688 224 aaKnown RBP6.96□□□□□ -1.29
CNOT4-205ENST00000423368 HSPA14Q0VDF9 509 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 FAAP100Q0VG06 881 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 AP3B2Q13367 1082 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 CCINQ13939 588 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 IKBKEQ14164 716 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 PRKD1Q15139 912 aaPredicted RBP6.96□□□□□ -1.29
CNOT4-205ENST00000423368 CCNG2Q16589 344 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 ECM1Q16610 540 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 IMPG1Q17R60 797 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 PITRM1Q5JRX3 1037 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 FAM160B1Q5W0V3 765 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 IL31Q6EBC2 164 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 DPY19L3Q6ZPD9 716 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 KIAA0408Q6ZU52 694 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 SV2BQ7L1I2 683 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 CCDC60Q8IWA6 550 aaPredicted RBP6.96□□□□□ -1.29
CNOT4-205ENST00000423368 FAM71DQ8N9W8 422 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 HLA-CQ95604 372 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 E2F7Q96AV8 911 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 NGLY1Q96IV0 654 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 ZSWIM1Q9BR11 485 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 TRAF4Q9BUZ4 470 aaPredicted RBP6.96□□□□□ -1.29
CNOT4-205ENST00000423368 SLC4A5Q9BY07 1137 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 RMND5AQ9H871 391 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 KBTBD4Q9NVX7 518 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 LGALS13Q9UHV8 139 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 CSADQ9Y600 493 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 SQORQ9Y6N5 450 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 GAKO14976 1311 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 PABPN1LA6NDY0 278 aaKnown RBP6.96□□□□□ -1.3
CNOT4-205ENST00000423368 MUSKO15146 869 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 PRPF4O43172 522 aaKnown RBP eCLIP6.96□□□□□ -1.3
CNOT4-205ENST00000423368 ALOX5P09917 674 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 TIE1P35590 1138 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 NRLP54845 237 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 JAM2P57087 298 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 VBP1P61758 197 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 TXNL4AP83876 142 aaKnown RBP6.96□□□□□ -1.3
CNOT4-205ENST00000423368 GUCA2AQ02747 115 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 BNIP2Q12982 314 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 TBRG1Q3YBR2 411 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 SPATS1Q496A3 300 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 KYAT3Q6YP21 454 aaKnown RBP6.96□□□□□ -1.3
CNOT4-205ENST00000423368 RHPN2Q8IUC4 686 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 PALM2Q8IXS6 379 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 LINC00518Q8N0U6 118 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 CBR4Q8N4T8 237 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 CAMKK1Q8N5S9 505 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.96□□□□□ -1.3
CNOT4-205ENST00000423368 ANKRD53Q8N9V6 530 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 FNIP1Q8TF40 1166 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 XAGE3Q8WTP9 111 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 RAPGEF4Q8WZA2 1011 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 JADE3Q92613 823 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 DHX38Q92620 1227 aaKnown RBP6.96□□□□□ -1.3
CNOT4-205ENST00000423368 SLC39A13Q96H72 371 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 RANGRFQ9HD47 186 aaPredicted RBP6.96□□□□□ -1.3
CNOT4-205ENST00000423368 PNPOQ9NVS9 261 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 SENP1Q9P0U3 644 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 RIMS3Q9UJD0 308 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 SCML1Q9UN30 329 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 TMEM5Q9Y2B1 443 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 SPATA31A3Q5VYP0 1347 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 CHD2O14647 1828 aaKnown RBP6.96□□□□□ -1.3
CNOT4-205ENST00000423368 NCAPD2Q15021 1401 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.96□□□□□ -1.3
CNOT4-205ENST00000423368 VWA5AO00534 786 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 SOCS2O14508 198 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 AXIN1O15169 862 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 SEC24AO95486 1093 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 PLATP00750 562 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 IFNA14P01570 189 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 UGT2B4P06133 528 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 GSNP06396 782 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 CD58P19256 250 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 KELP23276 732 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 SMSP52788 366 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 RPL10AP62906 217 aaKnown RBP6.96□□□□□ -1.3
CNOT4-205ENST00000423368 SP2Q02086 613 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 GRSF1Q12849 480 aaKnown RBP eCLIP6.96□□□□□ -1.3
CNOT4-205ENST00000423368 MRPL58Q14197 206 aaKnown RBP6.96□□□□□ -1.3
CNOT4-205ENST00000423368 NR6A1Q15406 480 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 CCDC14Q49A88 953 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 EPC2Q52LR7 807 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 TRMT1LQ7Z2T5 733 aaKnown RBP6.96□□□□□ -1.3
CNOT4-205ENST00000423368 SLFN11Q7Z7L1 901 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 PIGZQ86VD9 579 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 LDHDQ86WU2 507 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 OR8H3Q8N146 312 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 LNX2Q8N448 690 aa6.96□□□□□ -1.3
CNOT4-205ENST00000423368 PPM1NQ8N819 430 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms