RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 NPC1O15118 1278 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 DDX3YO15523 660 aaKnown RBP9.48□□□□□ -0.89
PDGFC-202ENST00000422544 LAMTOR5O43504 91 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 GALR2O43603 387 aaPredicted RBP9.48□□□□□ -0.89
PDGFC-202ENST00000422544 KDELR3O43731 214 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 ZMPSTE24O75844 475 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 SRPRAP08240 638 aaKnown RBP9.48□□□□□ -0.89
PDGFC-202ENST00000422544 KRT10P13645 584 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 HLA-EP13747 358 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 PRKCHP24723 683 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 ETFBP38117 255 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 CDKN2BP42772 138 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 PAPOLAP51003 745 aaKnown RBP9.48□□□□□ -0.89
PDGFC-202ENST00000422544 DNA2P51530 1060 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 CCR3P51677 355 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 RWDD2BP57060 319 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 ST8SIA6P61647 398 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 ARF5P84085 180 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 CRY1Q16526 586 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 PARP15Q460N3 678 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 KAZNQ674X7 775 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 NCBP2-AS2Q69YL0 99 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 KIAA1211LQ6NV74 962 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 TSSK4Q6SA08 328 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 TMEM92Q6UXU6 159 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 SPOCD1Q6ZMY3 1216 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 MAMSTRQ6ZN01 415 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 CCDC50Q8IVM0 306 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 ARHGAP12Q8IWW6 846 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 LZTR1Q8N653 840 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 ZNF366Q8N895 744 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 EXD1Q8NHP7 514 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 ALG3Q92685 438 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 ACDQ96AP0 544 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 MYO19Q96H55 970 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 ALS2CR12Q96Q35 445 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 GABRG3Q99928 467 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 IER2Q9BTL4 223 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 TMEM245Q9H330 911 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 MTG2Q9H4K7 406 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 SLC25A13Q9UJS0 675 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 HPCAL4Q9UM19 191 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 SLC8A2Q9UPR5 921 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 ACTL7AQ9Y615 435 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 ATG2BQ96BY7 2078 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 A0A1W2PQF6 199 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 CCDC66A2RUB6 948 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 ARHGAP42A6NI28 874 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 ZNF487B1APH4 448 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 J3KR12 359 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 APOL1O14791 398 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 SMAD6O43541 496 aaKnown RBP9.47□□□□□ -0.89
PDGFC-202ENST00000422544 SYNCRIPO60506 623 aaKnown RBP9.47□□□□□ -0.89
PDGFC-202ENST00000422544 MAP3K6O95382 1288 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 EPHX1P07099 455 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 PYGMP11217 842 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 HOXB2P14652 356 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 NNMTP40261 264 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 DYNLT1P63172 113 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 GBE1Q04446 702 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 CSTF1Q05048 431 aaKnown RBP9.47□□□□□ -0.89
PDGFC-202ENST00000422544 SLC10A2Q12908 348 aaPredicted RBP9.47□□□□□ -0.89
PDGFC-202ENST00000422544 ZNF211Q13398 564 aaPredicted RBP9.47□□□□□ -0.89
PDGFC-202ENST00000422544 SERINC3Q13530 473 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 ENPP2Q13822 863 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 PAFAH1B3Q15102 231 aaKnown RBP9.47□□□□□ -0.89
PDGFC-202ENST00000422544 E2F5Q15329 346 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 TAZQ16635 292 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 ACCSLQ4AC99 568 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 RETSATQ6NUM9 610 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 AADACL2Q6P093 401 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 ARHGAP36Q6ZRI8 547 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 VSIG1Q86XK7 387 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 RFX6Q8HWS3 928 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 MAML2Q8IZL2 1156 aaPredicted RBP9.47□□□□□ -0.89
PDGFC-202ENST00000422544 UBL4BQ8N7F7 174 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 PLD5Q8N7P1 536 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 ATP11CQ8NB49 1132 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 KDM1BQ8NB78 822 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.47□□□□□ -0.89
PDGFC-202ENST00000422544 HES6Q96HZ4 224 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 RBM41Q96IZ5 413 aaKnown RBP9.47□□□□□ -0.89
PDGFC-202ENST00000422544 HHIPQ96QV1 700 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 PRRX2Q99811 253 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 HEMGNQ9BXL5 484 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 SUN2Q9UH99 717 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 HS3ST2Q9Y278 367 aa9.47□□□□□ -0.89
PDGFC-202ENST00000422544 NBEAQ8NFP9 2946 aa9.46□□□□□ -0.89
PDGFC-202ENST00000422544 ZFYVE26Q68DK2 2539 aa9.46□□□□□ -0.89
PDGFC-202ENST00000422544 hCG_1818297A0A087WSY0 165 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 TCRBV21S2A2A0A5A6 115 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 MIF4GDA9UHW6 222 aaKnown RBP9.46□□□□□ -0.9
PDGFC-202ENST00000422544 K7ESF4 209 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 ATP9BO43861 1147 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 MFSD11O43934 449 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 CST8O60676 142 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 CD160O95971 181 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 SRCP12931 536 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 VAV1P15498 845 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 SERPINB6P35237 376 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms