RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 ZNF510Q9Y2H8 683 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 NR2E1Q9Y466 385 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 MCM3APO60318 1980 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 TIMM44O43615 452 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 NBNO60934 754 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 ZNF7P17097 686 aaPredicted RBP9.9□□□□□ -0.82
CMSS1-201ENST00000421999 ARFIP2P53365 341 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 STX3Q13277 289 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 SLC45A4Q5BKX6 768 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 CLLU1OSQ5K130 101 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 AGAP9Q5VTM2 703 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 FAM46CQ5VWP2 391 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 ZNF470Q6ECI4 717 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 GRAMD4Q6IC98 578 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 HIPK4Q8NE63 616 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 HNRNPLLQ8WVV9 542 aaKnown RBP9.9□□□□□ -0.82
CMSS1-201ENST00000421999 FAM167BQ9BTA0 163 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 DNAJC16Q9Y2G8 782 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 SNX10Q9Y5X0 201 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 HACD1B0YJ81 288 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 MTA2O94776 668 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 HSPA8P11142 646 aaKnown RBP9.9□□□□□ -0.82
CMSS1-201ENST00000421999 H2AFXP16104 143 aaPredicted RBP9.9□□□□□ -0.82
CMSS1-201ENST00000421999 NFKB1P19838 968 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 ELK3P41970 407 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 PTPN9P43378 593 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 PFKPQ01813 784 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 GBE1Q04446 702 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 FSCBQ5H9T9 825 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 MFSD4BQ5TF39 518 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 TXNDC8Q6A555 127 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 TXNRD3NBQ6F5E7 133 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 LINC01465Q8N7H1 131 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 CSPG4P5Q96PW8 444 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 TMEM175Q9BSA9 504 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 MCOLN1Q9GZU1 580 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 CDC42EP4Q9H3Q1 356 aaKnown RBP9.9□□□□□ -0.82
CMSS1-201ENST00000421999 FAM96AQ9H5X1 160 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 CYLDQ9NQC7 956 aa9.9□□□□□ -0.82
CMSS1-201ENST00000421999 MRPS17Q9Y2R5 130 aaKnown RBP9.9□□□□□ -0.82
CMSS1-201ENST00000421999 ERI2A8K979 691 aaKnown RBP9.9□□□□□ -0.83
CMSS1-201ENST00000421999 DNALI1O14645 258 aaPredicted RBP9.9□□□□□ -0.83
CMSS1-201ENST00000421999 ABL2P42684 1182 aa9.9□□□□□ -0.83
CMSS1-201ENST00000421999 MAPK8P45983 427 aa9.9□□□□□ -0.83
CMSS1-201ENST00000421999 TRADDQ15628 312 aa9.9□□□□□ -0.83
CMSS1-201ENST00000421999 INSCQ1MX18 579 aa9.9□□□□□ -0.83
CMSS1-201ENST00000421999 TTC39BQ5VTQ0 682 aaPredicted RBP9.9□□□□□ -0.83
CMSS1-201ENST00000421999 MRPL10Q7Z7H8 261 aaKnown RBP9.9□□□□□ -0.83
CMSS1-201ENST00000421999 SYTL1Q8IYJ3 562 aa9.9□□□□□ -0.83
CMSS1-201ENST00000421999 OR8D1Q8WZ84 308 aa9.9□□□□□ -0.83
CMSS1-201ENST00000421999 IGSF21Q96ID5 467 aa9.9□□□□□ -0.83
CMSS1-201ENST00000421999 CYP4F12Q9HCS2 524 aa9.9□□□□□ -0.83
CMSS1-201ENST00000421999 GKN1Q9NS71 199 aa9.9□□□□□ -0.83
CMSS1-201ENST00000421999 AGO1Q9UL18 857 aaKnown RBP9.9□□□□□ -0.83
CMSS1-201ENST00000421999 RNF112Q9ULX5 631 aa9.9□□□□□ -0.83
CMSS1-201ENST00000421999 TRIM33Q9UPN9 1127 aa9.9□□□□□ -0.83
CMSS1-201ENST00000421999 SMG5Q9UPR3 1016 aaKnown RBP9.9□□□□□ -0.83
CMSS1-201ENST00000421999 F5P12259 2224 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 ABLIM1O14639 778 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 ACSL4O60488 711 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 ZNF132P52740 706 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 HADHBP55084 474 aaKnown RBP9.89□□□□□ -0.83
CMSS1-201ENST00000421999 PHEXP78562 749 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 OGDHQ02218 1023 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 XRCC4Q13426 336 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 DPYSL3Q14195 570 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 CSHL1Q14406 222 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 HIST2H2ACQ16777 129 aaPredicted RBP9.89□□□□□ -0.83
CMSS1-201ENST00000421999 ANKRD20A2Q5SQ80 823 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 TMCO4Q5TGY1 634 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 ANKRD20A1Q5TYW2 823 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 SCARA3Q6AZY7 606 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 HIST2H2AA3Q6FI13 130 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 LINGO4Q6UY18 593 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 ARMC2Q8NEN0 867 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 PIWIL1Q96J94 861 aaKnown RBP9.89□□□□□ -0.83
CMSS1-201ENST00000421999 LRRC19Q9H756 370 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 MAN1C1Q9NR34 630 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 ADAM21Q9UKJ8 722 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 L3MBTL1Q9Y468 752 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 C1orf232A0A0U1RR37 186 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 BEST1O76090 585 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 AGTP01019 485 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 UGT2B4P06133 528 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 CTPS1P17812 591 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 EN2P19622 333 aaPredicted RBP9.89□□□□□ -0.83
CMSS1-201ENST00000421999 TACR2P21452 398 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 IFNA8P32881 189 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 CDKN2BP42772 138 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 SERPINH1P50454 418 aaKnown RBP9.89□□□□□ -0.83
CMSS1-201ENST00000421999 MGAT5Q09328 741 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 LHX8Q68G74 356 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 RAET1GQ6H3X3 334 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 GRASPQ7Z6J2 395 aaPredicted RBP9.89□□□□□ -0.83
CMSS1-201ENST00000421999 WDTC1Q8N5D0 677 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 OR10T2Q8NGX3 314 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 SLC26A7Q8TE54 656 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 SH3RF2Q8TEC5 729 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 KBTBD7Q8WVZ9 684 aa9.89□□□□□ -0.83
CMSS1-201ENST00000421999 IRGQQ8WZA9 623 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms