RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 TERB1Q8NA31 727 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 MAML1Q92585 1016 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 RUNDC3BQ96NL0 473 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 ZNF599Q96NL3 588 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 IL12RB2Q99665 862 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 C2orf49Q9BVC5 232 aaPredicted RBP12.74□□□□□ -0.37
TMEM53-206ENST00000420706 ELOVL2Q9NXB9 296 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 FEZ2Q9UHY8 353 aaPredicted RBP12.74□□□□□ -0.37
TMEM53-206ENST00000420706 KIAA1549LQ6ZVL6 1849 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 TBC1D3BA6NDS4 549 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 C5orf60A6NFR6 353 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 KCNK1O00180 336 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 MTSS1O43312 755 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 ZNF189O75820 626 aaPredicted RBP12.73□□□□□ -0.37
TMEM53-206ENST00000420706 MT-CO1P00395 513 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 JCHAINP01591 159 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 APODP05090 189 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 CCNB1P14635 433 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 PTPN3P26045 913 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 CLCN6P51797 869 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 NRLP54845 237 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 IFI35P80217 286 aaPredicted RBP12.73□□□□□ -0.37
TMEM53-206ENST00000420706 LMNB2Q03252 620 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 SLC10A7Q0GE19 358 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 WASHC5Q12768 1159 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 LBRQ14739 615 aaKnown RBP12.73□□□□□ -0.37
TMEM53-206ENST00000420706 CYTH1Q15438 398 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 TEX44Q53QW1 395 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 INO80DQ53TQ3 878 aaPredicted RBP12.73□□□□□ -0.37
TMEM53-206ENST00000420706 RETSATQ6NUM9 610 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 LINGO4Q6UY18 593 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 GJD3Q8N144 294 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 TEX26Q8N6G2 289 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 FAM71DQ8N9W8 422 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 LRRN4CLQ8ND94 238 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 CCDC26Q8TAB7 109 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 USP33Q8TEY7 942 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 GRK7Q8WTQ7 553 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 NSMCE1Q8WV22 266 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 SLCO2A1Q92959 643 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 RTP4Q96DX8 246 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 MSANTD3Q96H12 275 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 CCDC114Q96M63 670 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 CD320Q9NPF0 282 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 SEPT10Q9P0V9 454 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 UBA2Q9UBT2 640 aaPredicted RBP12.73□□□□□ -0.37
TMEM53-206ENST00000420706 AMACRQ9UHK6 382 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 ERVW-1Q9UQF0 538 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 NEU2Q9Y3R4 380 aa12.73□□□□□ -0.37
TMEM53-206ENST00000420706 PRUNE2Q8WUY3 3088 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 SGK1O00141 431 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 GCATO75600 419 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 SLU7O95391 586 aaKnown RBP12.72□□□□□ -0.37
TMEM53-206ENST00000420706 ASLP04424 464 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 ATP5BP06576 529 aaKnown RBP12.72□□□□□ -0.37
TMEM53-206ENST00000420706 ETS1P14921 441 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 TNFRSF4P43489 277 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 VASPP50552 380 aaPredicted RBP12.72□□□□□ -0.37
TMEM53-206ENST00000420706 RENBPP51606 427 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 ECT2LQ008S8 904 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 ZBTB17Q13105 803 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 DHX34Q14147 1143 aaKnown RBP12.72□□□□□ -0.37
TMEM53-206ENST00000420706 RFTN1Q14699 578 aaPredicted RBP12.72□□□□□ -0.37
TMEM53-206ENST00000420706 EIF4HQ15056 248 aaKnown RBP12.72□□□□□ -0.37
TMEM53-206ENST00000420706 PON2Q15165 354 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 MLF2Q15773 248 aaPredicted RBP12.72□□□□□ -0.37
TMEM53-206ENST00000420706 KCTD19Q17RG1 926 aaPredicted RBP12.72□□□□□ -0.37
TMEM53-206ENST00000420706 TMEM196Q5HYL7 178 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 ANKRD20A2Q5SQ80 823 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 TMCO4Q5TGY1 634 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 ANKRD20A1Q5TYW2 823 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 MARC1Q5VT66 337 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 ANKRD20A3Q5VUR7 823 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 NUDT18Q6ZVK8 323 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 GSTA5Q7RTV2 222 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 PRUNE1Q86TP1 453 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 SFTPA1Q8IWL2 248 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 ZNF567Q8N184 647 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 CNTD1Q8N815 330 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 GLIS1Q8NBF1 620 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 NOA1Q8NC60 698 aaKnown RBP12.72□□□□□ -0.37
TMEM53-206ENST00000420706 CYB5D2Q8WUJ1 264 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 CASKIN2Q8WXE0 1202 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 SORCS1Q8WY21 1168 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 EZH1Q92800 747 aaPredicted RBP12.72□□□□□ -0.37
TMEM53-206ENST00000420706 EXOC4Q96A65 974 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 RPL10LQ96L21 214 aaKnown RBP12.72□□□□□ -0.37
TMEM53-206ENST00000420706 MRGPRX3Q96LB0 322 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 VAT1Q99536 393 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 FERMT1Q9BQL6 677 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 CIPCQ9C0C6 399 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 RBM22Q9NW64 420 aaKnown RBP eCLIP12.72□□□□□ -0.37
TMEM53-206ENST00000420706 WNT16Q9UBV4 365 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 SLCO3A1Q9UIG8 710 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 SLC25A13Q9UJS0 675 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 HCN2Q9UL51 889 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 STARD13Q9Y3M8 1113 aa12.72□□□□□ -0.37
TMEM53-206ENST00000420706 ANTXRLA6NF34 631 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 K7EQS6 105 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 K7ERQ8 282 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms