RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 C9orf64Q5T6V5 341 aa21.08■□□□□ 0.97
HMGXB4-203ENST00000420166 PGBD3Q8N328 593 aa21.08■□□□□ 0.97
HMGXB4-203ENST00000420166 MRGPRX1Q96LB2 322 aa21.08■□□□□ 0.97
HMGXB4-203ENST00000420166 SLC39A8Q9C0K1 460 aa21.08■□□□□ 0.97
HMGXB4-203ENST00000420166 MKRN2Q9H000 416 aaKnown RBP21.08■□□□□ 0.97
HMGXB4-203ENST00000420166 SLC6A17Q9H1V8 727 aa21.08■□□□□ 0.97
HMGXB4-203ENST00000420166 FAM86C1Q9NVL1 165 aa21.08■□□□□ 0.97
HMGXB4-203ENST00000420166 ZSCAN5CA6NGD5 496 aaPredicted RBP21.07■□□□□ 0.96
HMGXB4-203ENST00000420166 ARHGAP42A6NI28 874 aa21.07■□□□□ 0.96
HMGXB4-203ENST00000420166 C3orf70A6NLC5 250 aaPredicted RBP21.07■□□□□ 0.96
HMGXB4-203ENST00000420166 ZNF487B1APH4 448 aa21.07■□□□□ 0.96
HMGXB4-203ENST00000420166 K7ERQ8 282 aa21.07■□□□□ 0.96
HMGXB4-203ENST00000420166 CD160O95971 181 aa21.07■□□□□ 0.96
HMGXB4-203ENST00000420166 VAV1P15498 845 aa21.07■□□□□ 0.96
HMGXB4-203ENST00000420166 GEMIN4P57678 1058 aaKnown RBP21.07■□□□□ 0.96
HMGXB4-203ENST00000420166 ACCSLQ4AC99 568 aa21.07■□□□□ 0.96
HMGXB4-203ENST00000420166 ANKRD20A8PQ5CZ79 823 aa21.07■□□□□ 0.96
HMGXB4-203ENST00000420166 C22orf39Q6P5X5 142 aa21.07■□□□□ 0.96
HMGXB4-203ENST00000420166 VSIG1Q86XK7 387 aa21.07■□□□□ 0.96
HMGXB4-203ENST00000420166 PCDH19Q8TAB3 1148 aa21.07■□□□□ 0.96
HMGXB4-203ENST00000420166 KIAA1524Q8TCG1 905 aa21.07■□□□□ 0.96
HMGXB4-203ENST00000420166 PTPRN2Q92932 1015 aa21.07■□□□□ 0.96
HMGXB4-203ENST00000420166 ACTL7AQ9Y615 435 aa21.07■□□□□ 0.96
HMGXB4-203ENST00000420166 SMAD6O43541 496 aaKnown RBP21.06■□□□□ 0.96
HMGXB4-203ENST00000420166 KRT86O43790 486 aa21.06■□□□□ 0.96
HMGXB4-203ENST00000420166 SERPINB6P35237 376 aa21.06■□□□□ 0.96
HMGXB4-203ENST00000420166 PAPOLAP51003 745 aaKnown RBP21.06■□□□□ 0.96
HMGXB4-203ENST00000420166 KIAA1324Q6UXG2 1013 aaKnown RBP21.06■□□□□ 0.96
HMGXB4-203ENST00000420166 Q6ZVU0 165 aa21.06■□□□□ 0.96
HMGXB4-203ENST00000420166 TMPRSS6Q8IU80 811 aa21.06■□□□□ 0.96
HMGXB4-203ENST00000420166 RNF10Q8N5U6 811 aaKnown RBP21.06■□□□□ 0.96
HMGXB4-203ENST00000420166 NETO2Q8NC67 525 aa21.06■□□□□ 0.96
HMGXB4-203ENST00000420166 PRDM16Q9HAZ2 1276 aa21.06■□□□□ 0.96
HMGXB4-203ENST00000420166 SHROOM3Q8TF72 1996 aa21.06■□□□□ 0.96
HMGXB4-203ENST00000420166 DFFAO00273 331 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 PALMO75781 387 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 C7P10643 843 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 CNR2P34972 360 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 NBL1P41271 181 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 MARCKSL1P49006 195 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 NHLH1Q02575 133 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 USP39Q53GS9 565 aaKnown RBP21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 ODF2Q5BJF6 829 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 ZNF776Q68DI1 518 aaPredicted RBP21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 NCBP2-AS2Q69YL0 99 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 LEKR1Q6ZMV7 388 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 ZNF662Q6ZS27 426 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 TP53INP2Q8IXH6 220 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 KATNAL2Q8IYT4 538 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 STK40Q8N2I9 435 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 PQLC3Q8N755 202 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 GAB3Q8WWW8 586 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 PRCCQ92733 491 aaPredicted RBP21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 KRT35Q92764 455 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 RNF25Q96BH1 459 aaPredicted RBP21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 SIPA1Q96FS4 1042 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 RNF157Q96PX1 679 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 CEP44Q9C0F1 390 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 RSPH9Q9H1X1 276 aaPredicted RBP21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 GUCA1BQ9UMX6 200 aa21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.05■□□□□ 0.96
HMGXB4-203ENST00000420166 HRO43593 1189 aa21.04■□□□□ 0.96
HMGXB4-203ENST00000420166 PRAMEF11O60813 436 aa21.04■□□□□ 0.96
HMGXB4-203ENST00000420166 CTNNA1P35221 906 aaKnown RBP21.04■□□□□ 0.96
HMGXB4-203ENST00000420166 SRSF5Q13243 272 aaKnown RBP21.04■□□□□ 0.96
HMGXB4-203ENST00000420166 ELAVL3Q14576 367 aaKnown RBP21.04■□□□□ 0.96
HMGXB4-203ENST00000420166 PAFAH1B3Q15102 231 aaKnown RBP21.04■□□□□ 0.96
HMGXB4-203ENST00000420166 METTL3Q86U44 580 aaKnown RBP21.04■□□□□ 0.96
HMGXB4-203ENST00000420166 NT5DC3Q86UY8 548 aa21.04■□□□□ 0.96
HMGXB4-203ENST00000420166 CACUL1Q86Y37 369 aa21.04■□□□□ 0.96
HMGXB4-203ENST00000420166 SYCE1Q8N0S2 351 aa21.04■□□□□ 0.96
HMGXB4-203ENST00000420166 PCDH20Q8N6Y1 951 aaKnown RBP21.04■□□□□ 0.96
HMGXB4-203ENST00000420166 FAM129BQ96TA1 746 aa21.04■□□□□ 0.96
HMGXB4-203ENST00000420166 KCNF1Q9H3M0 494 aa21.04■□□□□ 0.96
HMGXB4-203ENST00000420166 PDFQ9HBH1 243 aa21.04■□□□□ 0.96
HMGXB4-203ENST00000420166 FCF1Q9Y324 198 aaKnown RBP21.04■□□□□ 0.96
HMGXB4-203ENST00000420166 CAPN6Q9Y6Q1 641 aa21.04■□□□□ 0.96
HMGXB4-203ENST00000420166 ABCA7Q8IZY2 2146 aa21.04■□□□□ 0.96
HMGXB4-203ENST00000420166 J3KR12 359 aa21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 MFSD11O43934 449 aa21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 ZNF821O75541 412 aaPredicted RBP21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 RPP40O75818 363 aaKnown RBP21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 CTNNA2P26232 953 aa21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 P2RY2P41231 377 aa21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 RPS14P62263 151 aaKnown RBP21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 MFSD7Q6UXD7 560 aa21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 ARHGAP36Q6ZRI8 547 aa21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 CASKIN2Q8WXE0 1202 aa21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 RLN3Q8WXF3 142 aa21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 OR8D1Q8WZ84 308 aa21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 ISG20Q96AZ6 181 aaKnown RBP21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 CCDC114Q96M63 670 aa21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 TNKS2Q9H2K2 1166 aa21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 USP36Q9P275 1121 aaKnown RBP21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 UBA2Q9UBT2 640 aaPredicted RBP21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 IPO11Q9UI26 975 aaKnown RBP21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 INVSQ9Y283 1065 aa21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 PPP2R2CQ9Y2T4 447 aa21.03■□□□□ 0.96
HMGXB4-203ENST00000420166 SDK1Q7Z5N4 2213 aa21.02■□□□□ 0.96
HMGXB4-203ENST00000420166 CCDC66A2RUB6 948 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms