RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 SPEM1Q8N4L4 309 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 FRS2Q8WU20 508 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 SECISBP2LQ93073 1101 aaKnown RBP7.24□□□□□ -1.25
HMGN1-205ENST00000419378 WBP2Q969T9 261 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 MISP3Q96FF7 219 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 P2RY13Q9BPV8 354 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 CDADC1Q9BWV3 514 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 LRRC4Q9HBW1 653 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 FBRSL1Q9HCM7 1045 aaKnown RBP7.24□□□□□ -1.25
HMGN1-205ENST00000419378 CLIC5Q9NZA1 410 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 TBC1D14Q9P2M4 693 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 NUDT5Q9UKK9 219 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 RNF112Q9ULX5 631 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 CNTN6Q9UQ52 1028 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 SH3BP1Q9Y3L3 701 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 RIF1Q5UIP0 2472 aaKnown RBP7.24□□□□□ -1.25
HMGN1-205ENST00000419378 GVINP1Q7Z2Y8 2422 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 GPR179Q6PRD1 2367 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 KIAA1549LQ6ZVL6 1849 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 PRR23AA6NEV1 266 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 BECN2A8MW95 431 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 KCNJ18B7U540 433 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 MED26O95402 600 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 ZBED1O96006 694 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 EGFP01133 1207 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 RALAP11233 206 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 TDGF1P13385 188 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 EEF1GP26641 437 aaKnown RBP7.23□□□□□ -1.25
HMGN1-205ENST00000419378 PON1P27169 355 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 OPRD1P41143 372 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 RGS7P49802 495 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 GALK1P51570 392 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 MFAP3P55082 362 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 YWHAGP61981 247 aaKnown RBP eCLIP7.23□□□□□ -1.25
HMGN1-205ENST00000419378 SATB1Q01826 763 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 GOLGA8FQ08AF8 430 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 GOLGA8DPQ0D2H9 430 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 KCNJ12Q14500 433 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 DHCR24Q15392 516 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 STILQ15468 1287 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 CNGA2Q16280 664 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 EXOC3L4Q17RC7 722 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 VWA3BQ502W6 1294 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 MIIPQ5JXC2 388 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 C10orf120Q5SQS8 335 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 CCDC183Q5T5S1 534 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 PM20D1Q6GTS8 502 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 ZC3H14Q6PJT7 736 aaKnown RBP7.23□□□□□ -1.25
HMGN1-205ENST00000419378 GBP6Q6ZN66 633 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 C11orf57Q6ZUT1 292 aaPredicted RBP7.23□□□□□ -1.25
HMGN1-205ENST00000419378 USP53Q70EK8 1073 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 ENOSF1Q7L5Y1 443 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 MIB1Q86YT6 1006 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 ADGRG2Q8IZP9 1017 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 SIX6OS1Q8N1H7 587 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 ZNF276Q8N554 614 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 SLC35F5Q8WV83 523 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 NDRG1Q92597 394 aaKnown RBP7.23□□□□□ -1.25
HMGN1-205ENST00000419378 NELL1Q92832 810 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 CD101Q93033 1021 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 NKD2Q969F2 451 aaPredicted RBP7.23□□□□□ -1.25
HMGN1-205ENST00000419378 EXOC4Q96A65 974 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 OTUB2Q96DC9 234 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 FAM81BQ96LP2 452 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 CDK5RAP1Q96SZ6 601 aaKnown RBP7.23□□□□□ -1.25
HMGN1-205ENST00000419378 TUBGCP2Q9BSJ2 902 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 ULBP1Q9BZM6 244 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 NDST4Q9H3R1 872 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 SIX2Q9NPC8 291 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 UBE2TQ9NPD8 197 aaPredicted RBP7.23□□□□□ -1.25
HMGN1-205ENST00000419378 CNGB3Q9NQW8 809 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 SAMSN1Q9NSI8 373 aaKnown RBP7.23□□□□□ -1.25
HMGN1-205ENST00000419378 C2orf42Q9NWW7 574 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 RASAL2Q9UJF2 1139 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 LSM7Q9UK45 103 aaKnown RBP7.23□□□□□ -1.25
HMGN1-205ENST00000419378 AJAP1Q9UKB5 411 aaPredicted RBP7.23□□□□□ -1.25
HMGN1-205ENST00000419378 NFE2L3Q9Y4A8 694 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 R4GN57 208 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 FAM186AA6NE01 2351 aa7.23□□□□□ -1.25
HMGN1-205ENST00000419378 OTOGLQ3ZCN5 2332 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 DMXL1Q9Y485 3027 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 YJEFN3A6XGL0 299 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 E7ENQ6 273 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 PLD2O14939 933 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 HOXC11O43248 304 aaPredicted RBP7.22□□□□□ -1.25
HMGN1-205ENST00000419378 STC2O76061 302 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 PAPSS2O95340 614 aaPredicted RBP7.22□□□□□ -1.25
HMGN1-205ENST00000419378 LCP1P13796 627 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 RPL10P27635 214 aaKnown RBP7.22□□□□□ -1.25
HMGN1-205ENST00000419378 SSTR4P31391 388 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 CXCL12P48061 93 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 DAOAP59103 153 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 GAD2Q05329 585 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 EFEMP1Q12805 493 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 STX1AQ16623 288 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 ARHGAP44Q17R89 818 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 FBXO43Q4G163 708 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 TCP11X2Q5H9J9 407 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 LY6G5CQ5SRR4 150 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 BTBD8Q5XKL5 378 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms