RNA–Protein interactions for RNA: ENST00000418646.5

GPCPD1-202, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 4,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-202ENST00000418646 DUSP28Q4G0W2 176 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 LAIR2Q6ISS4 152 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 LCN8Q6JVE9 175 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 SAMD7Q7Z3H4 446 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 TP53INP2Q8IXH6 220 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 ZNF781Q8N8C0 355 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 OR13J1Q8NGT2 312 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 CCDC110Q8TBZ0 833 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 NAT14Q8WUY8 206 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 SPDL1Q96EA4 605 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 C1orf74Q96LT6 269 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 OR52B2Q96RD2 323 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 WRNIP1Q96S55 665 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 ZWILCHQ9H900 591 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 SETD4Q9NVD3 440 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 PCDH10Q9P2E7 1040 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 SLC17A6Q9P2U8 582 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 AP4E1Q9UPM8 1137 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 PCDHA9Q9Y5H5 950 aa4.55□□□□□ -1.68
GPCPD1-202ENST00000418646 SCN5AQ14524 2016 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 PIAS1O75925 651 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 CABYRO75952 493 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 KRT38O76015 456 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 LTFP02788 710 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 DARSP14868 501 aaKnown RBP4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 ZNF23P17027 643 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 GOT1P17174 413 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 SERPINB8P50452 374 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 GZMMP51124 257 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 CLNS1AP54105 237 aaKnown RBP4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 USP46P62068 366 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 CDC42EP1Q00587 391 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 PCDH1Q08174 1060 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 LAMC2Q13753 1193 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 LIPMQ5VYY2 423 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 GTF2IRD2BQ6EKJ0 949 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 KIAA0930Q6ICG6 404 aaPredicted RBP4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 EFCAB12Q6NXP0 572 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 SLC27A1Q6PCB7 646 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 AGMOQ6ZNB7 445 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 KIAA0408Q6ZU52 694 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 RFX8Q6ZV50 586 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 FASTKD5Q7L8L6 764 aaKnown RBP4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 GTF2IRD2Q86UP8 949 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 PNMA8AQ86V59 439 aaPredicted RBP4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 ARHGAP18Q8N392 663 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 PJA1Q8NG27 643 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 SPPL2BQ8TCT7 592 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 ZC3H15Q8WU90 426 aaKnown RBP4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 NLRP7Q8WX94 980 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 TFAP2CQ92754 450 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 NSMCE3Q96MG7 304 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 SMOQ99835 787 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 SH3GL3Q99963 347 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 CENPHQ9H3R5 247 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 RHOJQ9H4E5 214 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 COG4Q9H9E3 785 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 AGPAT4Q9NRZ5 378 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 NDUFA13Q9P0J0 144 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 ARMCX1Q9P291 453 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 DNMT3BQ9UBC3 853 aaKnown RBP4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 PTBP2Q9UKA9 531 aaKnown RBP4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 TRHDEQ9UKU6 1024 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 PCDHGB1Q9Y5G3 927 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 LRP4O75096 1905 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 LRRIQ4A6NIV6 560 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 SMIM23A6NLE4 172 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 POC1B-GALNT4F8VUJ3 575 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 COPEO14579 308 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 MT-ND3P03897 115 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 APOA4P06727 396 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 ATXN1LP0C7T5 689 aaKnown RBP4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 ZDHHC11BP0C7U3 371 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 CCNCP24863 283 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 PEX2P28328 305 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 NPY2RP49146 381 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 ADARP55265 1226 aaKnown RBP4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 CDH6P55285 790 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 FOXM1Q08050 763 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 KCTD21Q4G0X4 260 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 N4BP2L1Q5TBK1 243 aaPredicted RBP4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 KANK2Q63ZY3 851 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 PPP4R4Q6NUP7 873 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 GPRIN1Q7Z2K8 1008 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 KLHDC8AQ8IYD2 350 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 RNF168Q8IYW5 571 aaPredicted RBP4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 KIRREL3Q8IZU9 778 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 PYROXD2Q8N2H3 581 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 DCLK2Q8N568 766 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 ZNF513Q8N8E2 541 aaPredicted RBP4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 TRPC4APQ8TEL6 797 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 GAB3Q8WWW8 586 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 C18orf25Q96B23 403 aaPredicted RBP4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 B3GNT5Q9BYG0 378 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 TNKS2Q9H2K2 1166 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 RAB6BQ9NRW1 208 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 VPS45Q9NRW7 570 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 MRGBPQ9NV56 204 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 CLIC5Q9NZA1 410 aa4.54□□□□□ -1.68
GPCPD1-202ENST00000418646 VTI1BQ9UEU0 232 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms