RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 MAN1A2O60476 641 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 DEAF1O75398 565 aaPredicted RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 RFPL2O75678 378 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 SEC14L2O76054 403 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 TMEM63AO94886 807 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 KRT8P05787 483 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 FGF3P11487 239 aaPredicted RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 GLULP15104 373 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 CKMT2P17540 419 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 MX2P20592 715 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 PIK3R1P27986 724 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 SERPINB5P36952 375 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 KCNQ4P56696 695 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 BASP1P80723 227 aaKnown RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 GALK2Q01415 458 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 GALNT1Q10472 559 aaPredicted RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 MERTKQ12866 999 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 BFSP2Q13515 415 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 VPS72Q15906 364 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 EPC2Q52LR7 807 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 CEP55Q53EZ4 464 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 TMEM164Q5U3C3 297 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 PLA2G4FQ68DD2 849 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 ZCCHC8Q6NZY4 707 aaKnown RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 NEK5Q6P3R8 708 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 ABRAXAS1Q6UWZ7 409 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 KIAA0408Q6ZU52 694 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 PTAR1Q7Z6K3 402 aaPredicted RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 SNX32Q86XE0 403 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 IGDCC3Q8IVU1 814 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 RCOR2Q8IZ40 523 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 MCOLN2Q8IZK6 566 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 CACTIN-AS1Q8N1I8 211 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 ZCCHC7Q8N3Z6 543 aaKnown RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 PPM1NQ8N819 430 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 MFSD2AQ8NA29 543 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 RP9Q8TA86 221 aaKnown RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 PNPT1Q8TCS8 783 aaKnown RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 DPF3Q92784 378 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 VPS33AQ96AX1 596 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 VMP1Q96GC9 406 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 GLT1D1Q96MS3 346 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 MBOAT7Q96N66 472 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 SLITRK1Q96PX8 696 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 UHRF1Q96T88 793 aaPredicted RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 ADI1Q9BV57 179 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 NOL11Q9H8H0 719 aaKnown RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 WDR41Q9HAD4 459 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 WDR6Q9NNW5 1121 aaKnown RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 POLE4Q9NR33 117 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 AGPAT3Q9NRZ7 376 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 RAB20Q9NX57 234 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 EIF3LQ9Y262 564 aaKnown RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 PCDHAC2Q9Y5I4 1007 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 EVPLLA8MZ36 301 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 PI4K2BG5E9Z4 385 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 STX16-NPEPL1H3BU86 382 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 POLR1CO15160 346 aaPredicted RBP6.49□□□□□ -1.37
CCNT1-202ENST00000417344 GAS7O60861 476 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 NADKO95544 446 aaPredicted RBP6.49□□□□□ -1.37
CCNT1-202ENST00000417344 GSRP00390 522 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 NTRK1P04629 796 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 SERPINE1P05121 402 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 ENO3P13929 434 aaPredicted RBP6.49□□□□□ -1.37
CCNT1-202ENST00000417344 AKR1B1P15121 316 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 CD1EP15812 388 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 YBX3P16989 372 aaKnown RBP eCLIP6.49□□□□□ -1.372e-6■■□□□ 11.4
CCNT1-202ENST00000417344 GAP43P17677 238 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 TCN1P20061 433 aaPredicted RBP6.49□□□□□ -1.37
CCNT1-202ENST00000417344 GARTP22102 1010 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 CES1P23141 567 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 LTKP29376 864 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 PKLRP30613 574 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 ETFBP38117 255 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 CASP3P42574 277 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 DPP6P42658 865 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 GABRB2P47870 512 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 QARSP47897 775 aaKnown RBP6.49□□□□□ -1.37
CCNT1-202ENST00000417344 RPL10AP62906 217 aaKnown RBP6.49□□□□□ -1.37
CCNT1-202ENST00000417344 RHDQ02161 417 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 CLCQ05315 142 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 TNK2Q07912 1038 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 BMPR2Q13873 1038 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 SELPLGQ14242 412 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 STILQ15468 1287 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 SLC36A3Q495N2 470 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 ZFYVE27Q5T4F4 411 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 RSBN1Q5VWQ0 802 aaPredicted RBP6.49□□□□□ -1.37
CCNT1-202ENST00000417344 KIAA1841Q6NSI8 718 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 HMBOX1Q6NT76 420 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 RINT1Q6NUQ1 792 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 KCNT2Q6UVM3 1135 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 IDO2Q6ZQW0 420 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 LINC00299Q6ZSB3 139 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 CHSY3Q70JA7 882 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.49□□□□□ -1.37
CCNT1-202ENST00000417344 PACRGLQ8N7B6 248 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 ANKFN1Q8N957 763 aa6.49□□□□□ -1.37
CCNT1-202ENST00000417344 FLAD1Q8NFF5 587 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms