RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 NMRK1Q9NWW6 199 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 UBP1Q9NZI7 540 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 DNPEPQ9ULA0 475 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 PCDHGC3Q9UN70 934 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 DPPA5A6NC42 116 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 SOCS7O14512 581 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 FGF19O95750 216 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 DUPD1Q68J44 220 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 TTC30BQ8N4P2 665 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 RNF148Q8N7C7 305 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 KYQ8NBH2 561 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 ZSWIM2Q8NEG5 633 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 ZYG11BQ9C0D3 744 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 NDEL1Q9GZM8 345 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.01□□□□□ -0.33
SCAF8-203ENST00000417268 NOL4O94818 638 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 PROCP04070 461 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 ZNF23P17027 643 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 GRK2P25098 689 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 AIF1P55008 147 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 C21orf59P57076 290 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 DMPKQ09013 629 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 GSTA3Q16772 222 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 STRADAQ7RTN6 431 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 HEATR4Q86WZ0 1026 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 SRPK1Q96SB4 655 aaKnown RBP13.01□□□□□ -0.33
SCAF8-203ENST00000417268 ZNF670Q9BS34 389 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 ABHD14A-ACY1A0A1B0GW23 586 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 PRR23AA6NEV1 266 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 TRPC5OSA6NMA1 111 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 SKIV2L2P42285 1042 aaKnown RBP13.01□□□□□ -0.33
SCAF8-203ENST00000417268 CHN2P52757 468 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 FPGSQ05932 587 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 FAM83EQ2M2I3 478 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 SLC25A52Q3SY17 297 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 TPGS1Q6ZTW0 290 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 OR6Y1Q8NGX8 325 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 APOPT1Q96IL0 206 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 HNRNPABQ99729 332 aaKnown RBP13.01□□□□□ -0.33
SCAF8-203ENST00000417268 DAPK2Q9UIK4 370 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 TMEM191CA6NGB0 347 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 ABLIM1O14639 778 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 HNRNPRO43390 633 aaKnown RBP13.01□□□□□ -0.33
SCAF8-203ENST00000417268 MGRN1O60291 552 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 RASSF9O75901 435 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 OR4Q2P0C623 313 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 HLA-DPA1P20036 260 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 GABRR2P28476 465 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 TAF10Q12962 218 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 FBXL18Q96ME1 805 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 RNF157Q96PX1 679 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 CPXM1Q96SM3 734 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 C16orf70Q9BSU1 422 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 TRMT6Q9UJA5 497 aaKnown RBP13.01□□□□□ -0.33
SCAF8-203ENST00000417268 TJP1Q07157 1748 aa13.01□□□□□ -0.33
SCAF8-203ENST00000417268 CDH2P19022 906 aaPredicted RBP13□□□□□ -0.33
SCAF8-203ENST00000417268 POLR2EP19388 210 aaKnown RBP13□□□□□ -0.33
SCAF8-203ENST00000417268 WARSP23381 471 aaKnown RBP13□□□□□ -0.33
SCAF8-203ENST00000417268 RBBP7Q16576 425 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 PARP6Q2NL67 630 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 VARS2Q5ST30 1063 aaKnown RBP13□□□□□ -0.33
SCAF8-203ENST00000417268 SEL1L3Q68CR1 1132 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 TERB1Q8NA31 727 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 FBXO22Q8NEZ5 403 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 PCDHB18PQ96TA0 734 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 CEP41Q9BYV8 373 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 PRKD2Q9BZL6 878 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 POLR1EQ9GZS1 481 aaKnown RBP13□□□□□ -0.33
SCAF8-203ENST00000417268 SCN3BQ9NY72 215 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 ZMYND8Q9ULU4 1186 aaPredicted RBP13□□□□□ -0.33
SCAF8-203ENST00000417268 SMIM31A0A1B0GVY4 71 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 RGS20O76081 388 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 UBE3AQ05086 875 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 MRPL28Q13084 256 aaKnown RBP13□□□□□ -0.33
SCAF8-203ENST00000417268 TARBP2Q15633 366 aaKnown RBP13□□□□□ -0.33
SCAF8-203ENST00000417268 C16orf59Q7L2K0 433 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 SERBP1Q8NC51 408 aaKnown RBP eCLIP13□□□□□ -0.33
SCAF8-203ENST00000417268 FAM13CQ8NE31 585 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 ATXN10Q9UBB4 475 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 MYRFQ9Y2G1 1151 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 HEATR9A2RTY3 570 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 BCL10O95999 233 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 GJA5P36382 358 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 DRG2P55039 364 aaKnown RBP13□□□□□ -0.33
SCAF8-203ENST00000417268 CNKSR3Q6P9H4 555 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 DENND1CQ8IV53 801 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 SLC4A11Q8NBS3 891 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 LPCAT1Q8NF37 534 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 RNF217Q8TC41 542 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 PAWRQ96IZ0 340 aaKnown RBP13□□□□□ -0.33
SCAF8-203ENST00000417268 VPS26AO75436 327 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 RBL1P28749 1068 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 ELK3P41970 407 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 NDUFV1P49821 464 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 ERAP2Q6P179 960 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 HJURPQ8NCD3 748 aaPredicted RBP13□□□□□ -0.33
SCAF8-203ENST00000417268 EZH1Q92800 747 aaPredicted RBP13□□□□□ -0.33
SCAF8-203ENST00000417268 MS4A4AQ96JQ5 239 aa13□□□□□ -0.33
SCAF8-203ENST00000417268 NR1H4Q96RI1 486 aaPredicted RBP13□□□□□ -0.33
SCAF8-203ENST00000417268 PCYT2Q99447 389 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms