RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 OTOP1Q7RTM1 612 aa12.21□□□□□ -0.45
UBR4-205ENST00000417040 SYT12Q8IV01 421 aa12.21□□□□□ -0.45
UBR4-205ENST00000417040 ZC3H7AQ8IWR0 971 aaKnown RBP12.21□□□□□ -0.45
UBR4-205ENST00000417040 TINF2Q9BSI4 451 aa12.21□□□□□ -0.45
UBR4-205ENST00000417040 PCYOX1Q9UHG3 505 aa12.21□□□□□ -0.45
UBR4-205ENST00000417040 VAV1P15498 845 aa12.21□□□□□ -0.45
UBR4-205ENST00000417040 IL12AP29459 219 aa12.21□□□□□ -0.45
UBR4-205ENST00000417040 ADSSP30520 456 aa12.21□□□□□ -0.45
UBR4-205ENST00000417040 GK5Q6ZS86 529 aa12.21□□□□□ -0.45
UBR4-205ENST00000417040 ZNF671Q8TAW3 534 aa12.21□□□□□ -0.45
UBR4-205ENST00000417040 DLG3Q92796 817 aa12.21□□□□□ -0.45
UBR4-205ENST00000417040 PHF12Q96QT6 1004 aa12.21□□□□□ -0.45
UBR4-205ENST00000417040 SPAG4Q9NPE6 437 aa12.21□□□□□ -0.45
UBR4-205ENST00000417040 ATXN10Q9UBB4 475 aa12.21□□□□□ -0.45
UBR4-205ENST00000417040 KLQ9UEF7 1012 aa12.21□□□□□ -0.45
UBR4-205ENST00000417040 NRP2O60462 931 aa12.21□□□□□ -0.46
UBR4-205ENST00000417040 FADS2O95864 444 aaKnown RBP12.21□□□□□ -0.46
UBR4-205ENST00000417040 OR1E1P30953 314 aa12.21□□□□□ -0.46
UBR4-205ENST00000417040 GRK4P32298 578 aa12.21□□□□□ -0.46
UBR4-205ENST00000417040 CAP2P40123 477 aa12.21□□□□□ -0.46
UBR4-205ENST00000417040 TRMT11Q7Z4G4 463 aaKnown RBP12.21□□□□□ -0.46
UBR4-205ENST00000417040 TKTL2Q9H0I9 626 aa12.21□□□□□ -0.46
UBR4-205ENST00000417040 TTLL13PA6NNM8 815 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 OR6B1O95007 311 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 S100A3P33764 101 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 USP46P62068 366 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 EN1Q05925 392 aaPredicted RBP12.2□□□□□ -0.46
UBR4-205ENST00000417040 KLHL12Q53G59 568 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 GPSM1Q86YR5 675 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 HPS6Q86YV9 775 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.2□□□□□ -0.462e-7■■■■■ 58
UBR4-205ENST00000417040 CHST13Q8NET6 341 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 SLC2A14Q8TDB8 520 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 FAM84AQ96KN4 292 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 RIOX1Q9H6W3 641 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.2□□□□□ -0.462e-6■□□□□ 10.2
UBR4-205ENST00000417040 IKZF3Q9UKT9 509 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 DMTF1Q9Y222 760 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 MTF2Q9Y483 593 aaPredicted RBP12.2□□□□□ -0.46
UBR4-205ENST00000417040 RGSL1A5PLK6 1076 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 CAPN8A6NHC0 703 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 TRIM38O00635 465 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 RGS14O43566 566 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 CYP1A2P05177 515 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 SQLEQ14534 574 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 FAM183BPQ6ZVS7 135 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 SATL1Q86VE3 508 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 PROSER1Q86XN7 944 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 RAET1EQ8TD07 263 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 KIAA1257Q9ULG3 409 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 ADRB2P07550 413 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 UQCRBP14927 111 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 YWHAQP27348 245 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 CCR3P51677 355 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 SLC20A2Q08357 652 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 PHKG1Q16816 387 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 ANKS6Q68DC2 871 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 GANQ9H2C0 597 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 APOC4-APOC2K7ER74 178 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 APOC2P02655 101 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 SERPINA6P08185 405 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 PAICSP22234 425 aaKnown RBP12.2□□□□□ -0.46
UBR4-205ENST00000417040 HIRAP54198 1017 aaPredicted RBP12.2□□□□□ -0.46
UBR4-205ENST00000417040 TAS2R40P59535 323 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 ZNF268Q14587 947 aaPredicted RBP12.2□□□□□ -0.46
UBR4-205ENST00000417040 TCEA2Q15560 299 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 GNASQ5JWF2 1037 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 C4orf19Q8IY42 314 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 ZHX1-C8orf76Q96EF9 292 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 DEFB129Q9H1M3 183 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 PCDH12Q9NPG4 1184 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 U3KQV3 271 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 F9P00740 461 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 KRT6AP02538 564 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 TNK2Q07912 1038 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 DDR1Q08345 913 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 SPIRE1Q08AE8 756 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 MAD2L1Q13257 205 aaPredicted RBP12.2□□□□□ -0.46
UBR4-205ENST00000417040 CTXN3Q4LDR2 81 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 SLCO6A1Q86UG4 719 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 DENND6AQ8IWF6 608 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 ADHFE1Q8IWW8 467 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 AHI1Q8N157 1196 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 FAM13CQ8NE31 585 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 EPS8L1Q8TE68 723 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 ELMO1Q92556 727 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 AGXT2Q9BYV1 514 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 TAS2R13Q9NYV9 303 aa12.2□□□□□ -0.46
UBR4-205ENST00000417040 C15orf38-AP3S2A0A0A6YYH1 394 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 EPN2O95208 641 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 LRG1P02750 347 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 HPGDP15428 266 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 ADRA2BP18089 450 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 MSH3P20585 1137 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 ANXA11P50995 505 aaKnown RBP12.19□□□□□ -0.46
UBR4-205ENST00000417040 SLC6A3Q01959 620 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 COL9A3Q14050 684 aaPredicted RBP12.19□□□□□ -0.46
UBR4-205ENST00000417040 MOXD1Q6UVY6 613 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 SH3RF1Q7Z6J0 888 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 ARPINQ7Z6K5 226 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms