RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 NACC2Q96BF6 587 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 IDI2Q9BXS1 227 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 FRMD8P1Q9BZ68 369 aaPredicted RBP13.09□□□□□ -0.31
SCN1B-202ENST00000415950 MMADHCQ9H3L0 296 aaPredicted RBP13.09□□□□□ -0.31
SCN1B-202ENST00000415950 ELOVL6Q9H5J4 265 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 GTF2A1LQ9UNN4 478 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 GNEQ9Y223 722 aaKnown RBP13.09□□□□□ -0.31
SCN1B-202ENST00000415950 RBMX2Q9Y388 322 aaKnown RBP13.09□□□□□ -0.31
SCN1B-202ENST00000415950 SYNCRIPO60506 623 aaKnown RBP13.08□□□□□ -0.32
SCN1B-202ENST00000415950 AMHP03971 560 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 HALP42357 657 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 CXCL9Q07325 125 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 FOXR2Q6PJQ5 311 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 MON1BQ7L1V2 547 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 SLC41A1Q8IVJ1 513 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 UBASH3BQ8TF42 649 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 CERS2Q96G23 380 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 PRR11Q96HE9 360 aaPredicted RBP13.08□□□□□ -0.32
SCN1B-202ENST00000415950 SENP6Q9GZR1 1112 aaPredicted RBP13.08□□□□□ -0.32
SCN1B-202ENST00000415950 CLPBQ9H078 707 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 RIBC2Q9H4K1 309 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 SLC38A7Q9NVC3 462 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 SH3BP4Q9P0V3 963 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 LOC100506127A0A0U1RQW1 187 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 TIPRLO75663 272 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 ALDH1A1P00352 501 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 ASS1P00966 412 aaKnown RBP13.08□□□□□ -0.32
SCN1B-202ENST00000415950 TCF3P15923 654 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 CNTFP26441 200 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 LRPAP1P30533 357 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 BCAT1P54687 386 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 CAPSQ13938 189 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 PLCL1Q15111 1095 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 LDLRAP1Q5SW96 308 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 FLCNQ8NFG4 579 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 BDH2Q9BUT1 245 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 OSBPL10Q9BXB5 764 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 COMMD3-BMI1R4GMX3 469 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.08□□□□□ -0.32
SCN1B-202ENST00000415950 MGAT4DA6NG13 374 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 TRDMT1O14717 391 aaKnown RBP13.08□□□□□ -0.32
SCN1B-202ENST00000415950 TRIM24O15164 1050 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 MAP3K13O43283 966 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 GLP2RO95838 553 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 ZNF177Q13360 481 aaPredicted RBP13.08□□□□□ -0.32
SCN1B-202ENST00000415950 NID2Q14112 1375 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 TAF1CQ15572 869 aaPredicted RBP13.08□□□□□ -0.32
SCN1B-202ENST00000415950 PITRM1Q5JRX3 1037 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 ADGRD1Q6QNK2 874 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 DCP1BQ8IZD4 617 aaKnown RBP13.08□□□□□ -0.32
SCN1B-202ENST00000415950 RAB42Q8N4Z0 105 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 METTL6Q8TCB7 284 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 POMKQ9H5K3 350 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 NOL11Q9H8H0 719 aaKnown RBP13.08□□□□□ -0.32
SCN1B-202ENST00000415950 MYH13Q9UKX3 1938 aa13.08□□□□□ -0.32
SCN1B-202ENST00000415950 FAM20BO75063 409 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 SPIRE1Q08AE8 756 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 KLF10Q13118 480 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 SLC15A2Q16348 729 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 FAM98BQ52LJ0 330 aaKnown RBP13.07□□□□□ -0.32
SCN1B-202ENST00000415950 MFSD14CQ5VZR4 134 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 GIPC3Q8TF64 312 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 KATNAL1Q9BW62 490 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 LGALS13Q9UHV8 139 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 IFT172Q9UG01 1749 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 ROBO3Q96MS0 1386 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 MYOCOSA0A1B0GUC4 107 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 PSMD12O00232 456 aaPredicted RBP13.07□□□□□ -0.32
SCN1B-202ENST00000415950 CBX4O00257 560 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 WNT10BO00744 389 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 CCNT2O60583 730 aaKnown RBP13.07□□□□□ -0.32
SCN1B-202ENST00000415950 WFS1O76024 890 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 ERBB2P04626 1255 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 C2P06681 752 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 PIRTP0C851 137 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 PIK3R1P27986 724 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 PBLDP30039 288 aaPredicted RBP13.07□□□□□ -0.32
SCN1B-202ENST00000415950 RPS6KA3P51812 740 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 ATXN1P54253 815 aaKnown RBP13.07□□□□□ -0.32
SCN1B-202ENST00000415950 PSME3P61289 254 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 ACVR2BQ13705 512 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 LRRC38Q5VT99 294 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 TMEM198Q66K66 360 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 MILR1Q7Z6M3 343 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 ZDHHC14Q8IZN3 488 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 GALNT15Q8N3T1 639 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 ASZ1Q8WWH4 475 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 DGCR14Q96DF8 476 aaKnown RBP13.07□□□□□ -0.32
SCN1B-202ENST00000415950 RNFT2Q96EX2 444 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 MFSD14AQ96MC6 490 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 DPY30Q9C005 99 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 PORCNQ9H237 461 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 CDHR5Q9HBB8 845 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 SNX15Q9NRS6 342 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 ANKRD26Q9UPS8 1709 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 CXorf49A8MYA2 514 aaPredicted RBP13.07□□□□□ -0.32
SCN1B-202ENST00000415950 F9P00740 461 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 YWHAZP63104 245 aaKnown RBP13.07□□□□□ -0.32
SCN1B-202ENST00000415950 GSTA3Q16772 222 aa13.07□□□□□ -0.32
SCN1B-202ENST00000415950 CERCAMQ5T4B2 595 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms