RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 ITGB3P05106 788 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 CAPN1P07384 714 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 NR4A1P22736 598 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 DCKP27707 260 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 MAP3K7CLP57077 242 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 MAPRE1Q15691 268 aaKnown RBP7.96□□□□□ -1.13
SIK3-203ENST00000415541 GRIK4Q16099 956 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 SMU1Q2TAY7 513 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 GRPEL2Q8TAA5 225 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 HSPH1Q92598 858 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 CD101Q93033 1021 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 TMA16Q96EY4 203 aaKnown RBP7.96□□□□□ -1.13
SIK3-203ENST00000415541 BTBD6Q96KE9 485 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 C8orf48Q96LL4 319 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 TRPV6Q9H1D0 765 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 RAD21L1Q9H4I0 556 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 RUBCNLQ9H714 662 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 PRM3Q9NNZ6 103 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 XPNPEP1Q9NQW7 623 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 TAS2R14Q9NYV8 317 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 CDC14AQ9UNH5 594 aa7.96□□□□□ -1.13
SIK3-203ENST00000415541 A0A1W2PQ67 120 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 CCRL2O00421 344 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 HAT1O14929 419 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 KRT37O76014 449 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 LYPLA2O95372 231 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 GZMAP12544 262 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 IL32P24001 234 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 TBXAS1P24557 533 aaPredicted RBP7.96□□□□□ -1.14
SIK3-203ENST00000415541 CDKL1Q00532 357 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 GPS1Q13098 491 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 TMEM132DQ14C87 1099 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 NFE2Q16621 373 aaPredicted RBP7.96□□□□□ -1.14
SIK3-203ENST00000415541 AMHR2Q16671 573 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 RGMBQ6NW40 437 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 TLK2Q86UE8 772 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 ZNF598Q86UK7 904 aaKnown RBP7.96□□□□□ -1.14
SIK3-203ENST00000415541 CCDC28AQ8IWP9 274 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 ZNF276Q8N554 614 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 DNAJB3Q8WWF6 145 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 CRYGNQ8WXF5 182 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 GPR20Q99678 358 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 ACSS3Q9H6R3 686 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 C12orf10Q9HB07 376 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 NGRNQ9NPE2 291 aaKnown RBP7.96□□□□□ -1.14
SIK3-203ENST00000415541 SHOC2Q9UQ13 582 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 CAB39Q9Y376 341 aaPredicted RBP7.96□□□□□ -1.14
SIK3-203ENST00000415541 PPME1Q9Y570 386 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 LOC100653049A0A140TA62 436 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 SDR42E2A6NKP2 422 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 KRT34O76011 436 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 PGK1P00558 417 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 MAPTP10636 758 aaKnown RBP7.96□□□□□ -1.14
SIK3-203ENST00000415541 TSHRP16473 764 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 ITIH1P19827 911 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 GNL1P36915 607 aaPredicted RBP7.96□□□□□ -1.14
SIK3-203ENST00000415541 PRAMEP78395 509 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 SREBF2Q12772 1141 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 SELENBP1Q13228 472 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 CLEC16AQ2KHT3 1053 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 CCDC58Q4VC31 144 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 ZNF484Q5JVG2 852 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 KIAA1841Q6NSI8 718 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 BNC2Q6ZN30 1099 aaPredicted RBP7.96□□□□□ -1.14
SIK3-203ENST00000415541 SLC51BQ86UW2 128 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 PDCD6IPQ8WUM4 868 aaKnown RBP7.96□□□□□ -1.14
SIK3-203ENST00000415541 APBB2Q92870 758 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 PGBD4Q96DM1 585 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 TCF12Q99081 682 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 RTKNQ9BST9 563 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 CALN1Q9BXU9 219 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 POLR1BQ9H9Y6 1135 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 NEK6Q9HC98 313 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 MRPL47Q9HD33 250 aaKnown RBP7.96□□□□□ -1.14
SIK3-203ENST00000415541 COPG2Q9UBF2 871 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 PCSK1NQ9UHG2 260 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 ATPIF1Q9UII2 106 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 PCDHGB4Q9UN71 923 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 PCDHGB5Q9Y5G0 923 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 PCDHA2Q9Y5H9 948 aa7.96□□□□□ -1.14
SIK3-203ENST00000415541 FADS2P1A8MWK0 482 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 B8ZZF3 427 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 M0QYV0 167 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 MTSS1O43312 755 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 RGS20O76081 388 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 GSNP06396 782 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 STAG3L1P0CL83 205 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 FOSL1P15407 271 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 ITGAXP20702 1163 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 GRK2P25098 689 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 PTGS2P35354 604 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 TNFSF9P41273 254 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 SLC26A2P50443 739 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 ARSEP51690 589 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 TMBIM6P55061 237 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 SNRPFP62306 86 aaKnown RBP7.95□□□□□ -1.14
SIK3-203ENST00000415541 RALGDSQ12967 914 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 NRF1Q16656 503 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 BMT2Q1RMZ1 405 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 FGD3Q5JSP0 725 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms