RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 AHSGP02765 367 aa10.05□□□□□ -0.8
SS18-203ENST00000415083 AVPR1AP37288 418 aa10.05□□□□□ -0.8
SS18-203ENST00000415083 YBX1P67809 324 aaKnown RBP10.05□□□□□ -0.8
SS18-203ENST00000415083 ADAM17P78536 824 aa10.05□□□□□ -0.8
SS18-203ENST00000415083 FRG1Q14331 258 aaKnown RBP10.05□□□□□ -0.8
SS18-203ENST00000415083 IHHQ14623 411 aa10.05□□□□□ -0.8
SS18-203ENST00000415083 DCAF4L1Q3SXM0 396 aa10.05□□□□□ -0.8
SS18-203ENST00000415083 CCDC153Q494R4 210 aa10.05□□□□□ -0.8
SS18-203ENST00000415083 RPS27LQ71UM5 84 aaKnown RBP10.05□□□□□ -0.8
SS18-203ENST00000415083 ZC3HC1Q86WB0 502 aaKnown RBP10.05□□□□□ -0.8
SS18-203ENST00000415083 DSELQ8IZU8 1212 aa10.05□□□□□ -0.8
SS18-203ENST00000415083 RNF148Q8N7C7 305 aa10.05□□□□□ -0.8
SS18-203ENST00000415083 FAM156AQ8NDB6 213 aa10.05□□□□□ -0.8
SS18-203ENST00000415083 TRIM4Q9C037 500 aa10.05□□□□□ -0.8
SS18-203ENST00000415083 IARS2Q9NSE4 1012 aaKnown RBP10.05□□□□□ -0.8
SS18-203ENST00000415083 GMPR2Q9P2T1 348 aaKnown RBP10.05□□□□□ -0.8
SS18-203ENST00000415083 G3BP2Q9UN86 482 aaKnown RBP10.05□□□□□ -0.8
SS18-203ENST00000415083 TLL2Q9Y6L7 1015 aa10.05□□□□□ -0.8
SS18-203ENST00000415083 LAMA3Q16787 3333 aa10.05□□□□□ -0.8
SS18-203ENST00000415083 TCAF2A6NFQ2 919 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 CXCL11O14625 94 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 AP1G1O43747 822 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 TFAP2AP05549 437 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 PRDX6P30041 224 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 NOS2P35228 1153 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 ARL4AP40617 200 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 GLRBP48167 497 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 SERPINB8P50452 374 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 PKNOX1P55347 436 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 MYBPC1Q00872 1141 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 FOLH1Q04609 750 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 TTLL12Q14166 644 aaPredicted RBP10.04□□□□□ -0.8
SS18-203ENST00000415083 PDK3Q15120 406 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 CYHR1Q6ZMK1 362 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 ZNF410Q86VK4 478 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 SNX32Q86XE0 403 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 DENND6AQ8IWF6 608 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 NME8Q8N427 588 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 CPSF7Q8N684 471 aaKnown RBP10.04□□□□□ -0.8
SS18-203ENST00000415083 C3orf58Q8NDZ4 430 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 SPATA22Q8NHS9 363 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 KCTD4Q8WVF5 259 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 FAM149B1Q96BN6 582 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 VPS39Q96JC1 886 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 MROH8Q9H579 483 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 NMRAL1Q9HBL8 299 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.04□□□□□ -0.8
SS18-203ENST00000415083 SLC2A6Q9UGQ3 507 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 EEF2KO00418 725 aaKnown RBP10.04□□□□□ -0.8
SS18-203ENST00000415083 GABRDO14764 452 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 ATP9BO43861 1147 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 DLX3O60479 287 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 PABPC4LP0CB38 370 aaKnown RBP10.04□□□□□ -0.8
SS18-203ENST00000415083 MYL4P12829 197 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 KCNA5P22460 613 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 GRIA4P48058 902 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 ARCN1P48444 511 aaKnown RBP10.04□□□□□ -0.8
SS18-203ENST00000415083 MAP3K7CLP57077 242 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 MPP1Q00013 466 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 TRIP10Q15642 601 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 WSCD1Q658N2 575 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 KCNMB4Q86W47 210 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 WNT8BQ93098 351 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 GPR22Q99680 433 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 NUF2Q9BZD4 464 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 DRC3Q9H069 523 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 RBM38Q9H0Z9 239 aaKnown RBP10.04□□□□□ -0.8
SS18-203ENST00000415083 GBA3Q9H227 469 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 ADAM28Q9UKQ2 775 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 C9IYK1 514 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 AIM2O14862 343 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 CACNG3O60359 315 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 DARSP14868 501 aaKnown RBP10.04□□□□□ -0.8
SS18-203ENST00000415083 HDCP19113 662 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 ATXN3P54252 364 aaPredicted RBP10.04□□□□□ -0.8
SS18-203ENST00000415083 GJA9P57773 515 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 SCAPQ12770 1279 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 PDK1Q15118 436 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 ZYG11AQ6WRX3 759 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 SLC41A1Q8IVJ1 513 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.04□□□□□ -0.8
SS18-203ENST00000415083 TMEM102Q8N9M5 508 aaPredicted RBP10.04□□□□□ -0.8
SS18-203ENST00000415083 KDM1BQ8NB78 822 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 BEST2Q8NFU1 509 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 KCTD13Q8WZ19 329 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 CDKL2Q92772 493 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 USP13Q92995 863 aaPredicted RBP10.04□□□□□ -0.8
SS18-203ENST00000415083 RCN3Q96D15 328 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 CMTM5Q96DZ9 223 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 DCUN1D1Q96GG9 259 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 ZFP42Q96MM3 310 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 ACE2Q9BYF1 805 aaPredicted RBP10.04□□□□□ -0.8
SS18-203ENST00000415083 ULBP1Q9BZM6 244 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 UBE2OQ9C0C9 1292 aaKnown RBP10.04□□□□□ -0.8
SS18-203ENST00000415083 DNAI2Q9GZS0 605 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 FAM192AQ9GZU8 254 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 LRRC40Q9H9A6 602 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 TCF7L2Q9NQB0 619 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 NDFIP2Q9NV92 336 aa10.04□□□□□ -0.8
SS18-203ENST00000415083 ETAA1Q9NY74 926 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms