RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 CDK18Q07002 472 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 ZBTB17Q13105 803 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 GRAMD4Q6IC98 578 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 TXNDC11Q6PKC3 985 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 MDM1Q8TC05 714 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 ANKRD27Q96NW4 1050 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 PPP1R10Q96QC0 940 aaKnown RBP12.14□□□□□ -0.47
PTPRF-205ENST00000414879 FAM95CA0A1B0GW59 222 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 BIRC5O15392 142 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 KCNE1P15382 129 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 EEF1DP29692 281 aaKnown RBP12.14□□□□□ -0.47
PTPRF-205ENST00000414879 SSTR1P30872 391 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 ACOX1Q15067 660 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 NIPA2Q8N8Q9 360 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 CEP70Q8NHQ1 597 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 PCDHB18PQ96TA0 734 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 SAR1AQ9NR31 198 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 BATF3Q9NR55 127 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 TBC1D3BA6NDS4 549 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 TBL1XO60907 577 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 FKBP6O75344 327 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 NFKB1P19838 968 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 PRIM2P49643 509 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 NDST2P52849 883 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 GJA9P57773 515 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 CYP2A13Q16696 494 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 ZBTB41Q5SVQ8 909 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 STXBP5Q5T5C0 1151 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 SIAH1Q8IUQ4 282 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 CXorf40AQ8TE69 158 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 MAGEH1Q9H213 219 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 TCF7L2Q9NQB0 619 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 CORO1CQ9ULV4 474 aaPredicted RBP12.14□□□□□ -0.47
PTPRF-205ENST00000414879 KPNA3O00505 521 aaPredicted RBP12.14□□□□□ -0.47
PTPRF-205ENST00000414879 MAP3K13O43283 966 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 NFATC1O95644 943 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 GOT1P17174 413 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 ITGB6P18564 788 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 SLC1A6P48664 564 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 AQP5P55064 265 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 ATP6AP1LQ52LC2 224 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 BNC2Q6ZN30 1099 aaPredicted RBP12.14□□□□□ -0.47
PTPRF-205ENST00000414879 CRYBG2Q8N1P7 616 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 EME1Q96AY2 570 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 NUP98P52948 1817 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 TUBGCP6Q96RT7 1819 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 MYH3P11055 1940 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 MAP2K7O14733 419 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 AKAP10O43572 662 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 FLOT2Q14254 428 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 DENND1CQ8IV53 801 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 STX19Q8N4C7 294 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 TEX9Q8N6V9 391 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 TCP10LQ8TDR4 215 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 CPXM1Q96SM3 734 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 NEUROG2Q9H2A3 272 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 MRPL46Q9H2W6 279 aaKnown RBP12.13□□□□□ -0.47
PTPRF-205ENST00000414879 KCNK4Q9NYG8 393 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 GGA2Q9UJY4 613 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 NOCTQ9UK39 431 aaKnown RBP12.13□□□□□ -0.47
PTPRF-205ENST00000414879 AGO1Q9UL18 857 aaKnown RBP12.13□□□□□ -0.47
PTPRF-205ENST00000414879 STYXL1Q9Y6J8 313 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 PAGE1O75459 146 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 FKBP9O95302 570 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 CST3P01034 146 aaPredicted RBP12.13□□□□□ -0.47
PTPRF-205ENST00000414879 COL6A2P12110 1019 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 MTM1Q13496 603 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 TEX44Q53QW1 395 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 MAMDC4Q6UXC1 1216 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 FKBP9P1Q75LS8 142 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 APLFQ8IW19 511 aaPredicted RBP12.13□□□□□ -0.47
PTPRF-205ENST00000414879 C12orf29Q8N999 325 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 NTAN1Q96AB6 310 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 MYCBPQ99417 103 aaPredicted RBP12.13□□□□□ -0.47
PTPRF-205ENST00000414879 FGFBP2Q9BYJ0 223 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 CDHR5Q9HBB8 845 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 CNTN3Q9P232 1028 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 GJB6O95452 261 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 MLYCDO95822 493 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 ANXA5P08758 320 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 RPL3P39023 403 aaKnown RBP12.13□□□□□ -0.47
PTPRF-205ENST00000414879 TRIP4Q15650 581 aaPredicted RBP12.13□□□□□ -0.47
PTPRF-205ENST00000414879 PKN2Q16513 984 aaKnown RBP12.13□□□□□ -0.47
PTPRF-205ENST00000414879 ADAMTSL2Q86TH1 951 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 ECHDC2Q86YB7 292 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 CPA6Q8N4T0 437 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 VPS33AQ96AX1 596 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 SEMA3CQ99985 751 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 GLOD4Q9HC38 313 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 RREB1Q92766 1687 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 RGS14O43566 566 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 HOXB6P17509 224 aaKnown RBP12.13□□□□□ -0.47
PTPRF-205ENST00000414879 TPH1P17752 444 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 ATP5F1P24539 256 aaPredicted RBP12.13□□□□□ -0.47
PTPRF-205ENST00000414879 PTPN4P29074 926 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 CD86P42081 329 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 CDH4P55283 916 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 TAF10Q12962 218 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 SGO1Q5FBB7 561 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 LDLRAD1Q5T700 205 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms