RNA–Protein interactions for RNA: ENST00000414773.5

CLGN-202, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 2,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-202ENST00000414773 CASC4Q6P4E1 433 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 GRASPQ7Z6J2 395 aaPredicted RBP11.17□□□□□ -0.62
CLGN-202ENST00000414773 TNS4Q8IZW8 715 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 GDPD5Q8WTR4 605 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 PGM2Q96G03 612 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 SPON2Q9BUD6 331 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 RABGEF1Q9UJ41 708 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 LSM7Q9UK45 103 aaKnown RBP11.17□□□□□ -0.62
CLGN-202ENST00000414773 ADAM21Q9UKJ8 722 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 CCL26Q9Y258 94 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.17□□□□□ -0.62
CLGN-202ENST00000414773 CCDC195A0A1B0GUA6 201 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 FOXO6A8MYZ6 492 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 LEFTY2O00292 366 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 IVLP07476 585 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 RHOCP08134 193 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 MLNP12872 115 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 RENBPP51606 427 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 EPHA5P54756 1037 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 IL10RBQ08334 325 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 ITKQ08881 620 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 HNRNPDQ14103 355 aaKnown RBP11.17□□□□□ -0.62
CLGN-202ENST00000414773 MARC1Q5VT66 337 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 PPP2R2DQ66LE6 453 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 PDE12Q6L8Q7 609 aaKnown RBP11.17□□□□□ -0.62
CLGN-202ENST00000414773 CROCCP2Q86T23 111 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 BBS7Q8IWZ6 715 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 XPO6Q96QU8 1125 aaKnown RBP11.17□□□□□ -0.62
CLGN-202ENST00000414773 FCRL5Q96RD9 977 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 EBNA1BP2Q99848 306 aaKnown RBP11.17□□□□□ -0.62
CLGN-202ENST00000414773 PLAC1Q9HBJ0 212 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 ACTL7AQ9Y615 435 aa11.17□□□□□ -0.62
CLGN-202ENST00000414773 CACNG3O60359 315 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 XYLBO75191 536 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 TCEA3O75764 348 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 SUN1O94901 812 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 LATS1O95835 1130 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 GLDCP23378 1020 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 GCAP28676 217 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 HOXA9P31269 272 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 ATP1A2P50993 1020 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 CBLBQ13191 982 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 CHST9Q7L1S5 443 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 RTL10Q7L3V2 364 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 CARNMT1Q8N4J0 409 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 C12orf76Q8N812 135 aaPredicted RBP11.16□□□□□ -0.62
CLGN-202ENST00000414773 DNAAF3Q8N9W5 541 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 NSMCE1Q8WV22 266 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 TLCD1Q96CP7 247 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 LRRC39Q96DD0 335 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 TMA16Q96EY4 203 aaKnown RBP11.16□□□□□ -0.62
CLGN-202ENST00000414773 MAGEH1Q9H213 219 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 TLE6Q9H808 572 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 SYBUQ9NX95 663 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.16□□□□□ -0.62
CLGN-202ENST00000414773 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.16□□□□□ -0.62
CLGN-202ENST00000414773 TCRBV9S1A1TA0A576 114 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 TTC24A2A3L6 582 aaPredicted RBP11.16□□□□□ -0.62
CLGN-202ENST00000414773 EPOPA6NHQ4 379 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 SDR42E2A6NKP2 422 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 PRAMEF11O60813 436 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 HNRNPA1P09651 372 aaKnown RBP eCLIP11.16□□□□□ -0.62
CLGN-202ENST00000414773 NR1D1P20393 614 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 HOXD9P28356 352 aaPredicted RBP11.16□□□□□ -0.62
CLGN-202ENST00000414773 AVPR1AP37288 418 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 MMP13P45452 471 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 CXorf57Q6NSI4 855 aaKnown RBP11.16□□□□□ -0.62
CLGN-202ENST00000414773 UNC5AQ6ZN44 842 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 CYP4X1Q8N118 509 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 IPMKQ8NFU5 416 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 SH3RF2Q8TEC5 729 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 STAMBPL1Q96FJ0 436 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 PRKD2Q9BZL6 878 aa11.16□□□□□ -0.62
CLGN-202ENST00000414773 AAR2Q9Y312 384 aaKnown RBP11.16□□□□□ -0.62
CLGN-202ENST00000414773 ERI2A8K979 691 aaKnown RBP11.15□□□□□ -0.62
CLGN-202ENST00000414773 H0Y626 953 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 PMPCBO75439 489 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 C1RP00736 705 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 TSHRP16473 764 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 NRIP1P48552 1158 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 LBRQ14739 615 aaKnown RBP11.15□□□□□ -0.62
CLGN-202ENST00000414773 FSCBQ5H9T9 825 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 RNF219Q5W0B1 726 aaPredicted RBP11.15□□□□□ -0.62
CLGN-202ENST00000414773 HTR3DQ70Z44 454 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 KDELC2Q7Z4H8 507 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 PRPF39Q86UA1 669 aaKnown RBP11.15□□□□□ -0.62
CLGN-202ENST00000414773 CMTM8Q8IZV2 173 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 ING5Q8WYH8 240 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 FATE1Q969F0 183 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 ZNF707Q96C28 371 aaPredicted RBP11.15□□□□□ -0.62
CLGN-202ENST00000414773 GDF15Q99988 308 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 RETREG1Q9H6L5 497 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 ACSS3Q9H6R3 686 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 LRRC40Q9H9A6 602 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 ATP13A1Q9HD20 1204 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 CASS4Q9NQ75 786 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 MSRAQ9UJ68 235 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 ARHGAP26Q9UNA1 814 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 TRANK1O15050 2925 aa11.15□□□□□ -0.62
CLGN-202ENST00000414773 NOTCH4Q99466 2003 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms