RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 MAGEB5Q9BZ81 275 aa15.03■□□□□ -0
CHD1-202ENST00000414220 PABPC3Q9H361 631 aaKnown RBP15.03■□□□□ -0
CHD1-202ENST00000414220 MTG2Q9H4K7 406 aa15.03■□□□□ -0
CHD1-202ENST00000414220 DYRK4Q9NR20 520 aa15.03■□□□□ -0
CHD1-202ENST00000414220 GPATCH2LQ9NWQ4 482 aa15.03■□□□□ -0
CHD1-202ENST00000414220 FBXL12Q9NXK8 326 aa15.03■□□□□ -0
CHD1-202ENST00000414220 IMPACTQ9P2X3 320 aa15.03■□□□□ -0
CHD1-202ENST00000414220 ZNF212Q9UDV6 495 aa15.03■□□□□ -0
CHD1-202ENST00000414220 SUSD2Q9UGT4 822 aa15.03■□□□□ -0
CHD1-202ENST00000414220 MBD1Q9UIS9 605 aaPredicted RBP15.03■□□□□ -0
CHD1-202ENST00000414220 MEI4A8MW99 385 aa15.02■□□□□ -0
CHD1-202ENST00000414220 KHNYNO15037 678 aaKnown RBP15.02■□□□□ -0
CHD1-202ENST00000414220 BUB1O43683 1085 aa15.02■□□□□ -0
CHD1-202ENST00000414220 RNASEH2AO75792 299 aaKnown RBP15.02■□□□□ -0
CHD1-202ENST00000414220 PRNPP04156 253 aa15.02■□□□□ -0
CHD1-202ENST00000414220 KRT7P08729 469 aa15.02■□□□□ -0
CHD1-202ENST00000414220 ZNF806P0C7X5 589 aa15.02■□□□□ -0
CHD1-202ENST00000414220 C7P10643 843 aa15.02■□□□□ -0
CHD1-202ENST00000414220 CDC25BP30305 580 aa15.02■□□□□ -0
CHD1-202ENST00000414220 MAN1A1P33908 653 aa15.02■□□□□ -0
CHD1-202ENST00000414220 HOXD12P35452 270 aa15.02■□□□□ -0
CHD1-202ENST00000414220 ACVRL1P37023 503 aa15.02■□□□□ -0
CHD1-202ENST00000414220 PSMD8P48556 350 aa15.02■□□□□ -0
CHD1-202ENST00000414220 SERPINH1P50454 418 aaKnown RBP15.02■□□□□ -0
CHD1-202ENST00000414220 DNA2P51530 1060 aa15.02■□□□□ -0
CHD1-202ENST00000414220 RAD51Q06609 339 aa15.02■□□□□ -0
CHD1-202ENST00000414220 DPYSL2Q16555 572 aa15.02■□□□□ -0
CHD1-202ENST00000414220 KCNT1Q5JUK3 1230 aa15.02■□□□□ -0
CHD1-202ENST00000414220 LINGO4Q6UY18 593 aa15.02■□□□□ -0
CHD1-202ENST00000414220 ARMCX6Q7L4S7 300 aa15.02■□□□□ -0
CHD1-202ENST00000414220 FAM124AQ86V42 546 aa15.02■□□□□ -0
CHD1-202ENST00000414220 SYT12Q8IV01 421 aa15.02■□□□□ -0
CHD1-202ENST00000414220 UMODL1-AS1Q8N2C9 162 aa15.02■□□□□ -0
CHD1-202ENST00000414220 TXLNBQ8N3L3 684 aa15.02■□□□□ -0
CHD1-202ENST00000414220 FRMD1Q8N878 549 aa15.02■□□□□ -0
CHD1-202ENST00000414220 SLC35G2Q8TBE7 412 aa15.02■□□□□ -0
CHD1-202ENST00000414220 FRS2Q8WU20 508 aa15.02■□□□□ -0
CHD1-202ENST00000414220 ZNF419Q96HQ0 510 aaPredicted RBP15.02■□□□□ -0
CHD1-202ENST00000414220 PPP1R16AQ96I34 528 aa15.02■□□□□ -0
CHD1-202ENST00000414220 BTBD6Q96KE9 485 aa15.02■□□□□ -0
CHD1-202ENST00000414220 KCTD15Q96SI1 283 aaPredicted RBP15.02■□□□□ -0
CHD1-202ENST00000414220 PACSIN1Q9BY11 444 aa15.02■□□□□ -0
CHD1-202ENST00000414220 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.02■□□□□ -0
CHD1-202ENST00000414220 FZD4Q9ULV1 537 aa15.02■□□□□ -0
CHD1-202ENST00000414220 TPX2Q9ULW0 747 aaKnown RBP15.02■□□□□ -0
CHD1-202ENST00000414220 LRRC72A6NJI9 287 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 RASA4BC9J798 803 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 RASA4O43374 803 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 MT-CO1P00395 513 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 RARAP10276 462 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 GOT1P17174 413 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 ERCC2P18074 760 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 SERPINB6P35237 376 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 NOP2P46087 812 aaKnown RBP15.01□□□□□ -0.01
CHD1-202ENST00000414220 SNRPD1P62314 119 aaKnown RBP15.01□□□□□ -0.01
CHD1-202ENST00000414220 MESDQ14696 234 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 CA9Q16790 459 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 SMTNL2Q2TAL5 461 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 AASDHQ4L235 1098 aaPredicted RBP15.01□□□□□ -0.01
CHD1-202ENST00000414220 INO80DQ53TQ3 878 aaPredicted RBP15.01□□□□□ -0.01
CHD1-202ENST00000414220 C22orf39Q6P5X5 142 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 Q6ZVU0 165 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 RYBPQ8N488 228 aaPredicted RBP15.01□□□□□ -0.01
CHD1-202ENST00000414220 HDDC3Q8N4P3 179 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 KCTD6Q8NC69 237 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 RFFLQ8WZ73 363 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 ISG20Q96AZ6 181 aaKnown RBP15.01□□□□□ -0.01
CHD1-202ENST00000414220 CALR3Q96L12 384 aaKnown RBP15.01□□□□□ -0.01
CHD1-202ENST00000414220 HSPA12BQ96MM6 686 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 PEBP4Q96S96 227 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 FAM129BQ96TA1 746 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 NUSAP1Q9BXS6 441 aaKnown RBP15.01□□□□□ -0.01
CHD1-202ENST00000414220 NDFIP2Q9NV92 336 aa15.01□□□□□ -0.01
CHD1-202ENST00000414220 RCOR3Q9P2K3 495 aaPredicted RBP15.01□□□□□ -0.01
CHD1-202ENST00000414220 ZFHX2Q9C0A1 2572 aaPredicted RBP15□□□□□ -0.01
CHD1-202ENST00000414220 TMEM110-MUSTN1A8MSY1 372 aa15□□□□□ -0.01
CHD1-202ENST00000414220 MID1O15344 667 aa15□□□□□ -0.01
CHD1-202ENST00000414220 SLC7A4O43246 635 aa15□□□□□ -0.01
CHD1-202ENST00000414220 ZMPSTE24O75844 475 aa15□□□□□ -0.01
CHD1-202ENST00000414220 SEMA4FO95754 770 aa15□□□□□ -0.01
CHD1-202ENST00000414220 CHRNA3P32297 505 aa15□□□□□ -0.01
CHD1-202ENST00000414220 SLC1A1P43005 524 aa15□□□□□ -0.01
CHD1-202ENST00000414220 CDH6P55285 790 aa15□□□□□ -0.01
CHD1-202ENST00000414220 ARF5P84085 180 aa15□□□□□ -0.01
CHD1-202ENST00000414220 PDK2Q15119 407 aa15□□□□□ -0.01
CHD1-202ENST00000414220 DUOXA1Q1HG43 343 aa15□□□□□ -0.01
CHD1-202ENST00000414220 CARD16Q5EG05 197 aa15□□□□□ -0.01
CHD1-202ENST00000414220 ARTNQ5T4W7 220 aa15□□□□□ -0.01
CHD1-202ENST00000414220 TMCO3Q6UWJ1 677 aa15□□□□□ -0.01
CHD1-202ENST00000414220 PRR23CQ6ZRP0 262 aa15□□□□□ -0.01
CHD1-202ENST00000414220 PLPP6Q8IY26 295 aa15□□□□□ -0.01
CHD1-202ENST00000414220 DEFB119Q8N690 84 aa15□□□□□ -0.01
CHD1-202ENST00000414220 TMIEQ8NEW7 156 aa15□□□□□ -0.01
CHD1-202ENST00000414220 PIP4K2CQ8TBX8 421 aa15□□□□□ -0.01
CHD1-202ENST00000414220 LRIG1Q96JA1 1093 aa15□□□□□ -0.01
CHD1-202ENST00000414220 HEPHQ9BQS7 1158 aa15□□□□□ -0.01
CHD1-202ENST00000414220 CWC15Q9P013 229 aaKnown RBP15□□□□□ -0.01
CHD1-202ENST00000414220 IL36AQ9UHA7 158 aa15□□□□□ -0.01
CHD1-202ENST00000414220 NEU3Q9UQ49 428 aa15□□□□□ -0.01
CHD1-202ENST00000414220 EPN1Q9Y6I3 576 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms