RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 PLK4O00444 970 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 TM4SF5O14894 197 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 ZMPSTE24O75844 475 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 FAM228BP0C875 321 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 MYBL1P10243 752 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 GNSP15586 552 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 C5AR1P21730 350 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 ACVRL1P37023 503 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 MAPK8P45983 427 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 MAPKAPK2P49137 400 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 METAP1P53582 386 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 AIF1P55008 147 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 ARF5P84085 180 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 GFPT1Q06210 699 aaPredicted RBP15.15■□□□□ 0.02
LIMS4-201ENST00000413601 SPECC1LQ69YQ0 1117 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 RETSATQ6NUM9 610 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 DSG4Q86SJ6 1040 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 ZCCHC9Q8N567 271 aaKnown RBP15.15■□□□□ 0.02
LIMS4-201ENST00000413601 ARHGEF2Q92974 986 aaKnown RBP15.15■□□□□ 0.02
LIMS4-201ENST00000413601 BIRC7Q96CA5 298 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 RETREG1Q9H6L5 497 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 ARHGAP20Q9P2F6 1191 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 SUSD2Q9UGT4 822 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 PCSK1NQ9UHG2 260 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 FZD4Q9ULV1 537 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.15■□□□□ 0.02
LIMS4-201ENST00000413601 ACTL7AQ9Y615 435 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 SCINQ9Y6U3 715 aa15.15■□□□□ 0.02
LIMS4-201ENST00000413601 CACNA1EQ15878 2313 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 A0A1B0GTW7 788 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 MCF2LO15068 1137 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 RNF8O76064 485 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 FSBPO95073 299 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 GOT1P17174 413 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 EPHB2P29323 1055 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 DRD3P35462 400 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 GALCP54803 685 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 SEMA3BQ13214 749 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 POM121L1PQ3SYA9 428 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 C22orf39Q6P5X5 142 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 NCEH1Q6PIU2 408 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.14■□□□□ 0.01
LIMS4-201ENST00000413601 OR2A12Q8NGT7 310 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 PIP4K2CQ8TBX8 421 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 FNIP1Q8TF40 1166 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 PEBP4Q96S96 227 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 EPAS1Q99814 870 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 GTPBP2Q9BX10 602 aaKnown RBP15.14■□□□□ 0.01
LIMS4-201ENST00000413601 ACE2Q9BYF1 805 aaPredicted RBP15.14■□□□□ 0.01
LIMS4-201ENST00000413601 THAP2Q9H0W7 228 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 MAGEH1Q9H213 219 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 TNKS2Q9H2K2 1166 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 MRPL47Q9HD33 250 aaKnown RBP15.14■□□□□ 0.01
LIMS4-201ENST00000413601 PPM1HQ9ULR3 514 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 AP4E1Q9UPM8 1137 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 SLCO1B1Q9Y6L6 691 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 DNAH14Q0VDD8 3507 aa15.14■□□□□ 0.01
LIMS4-201ENST00000413601 ARHGAP33O14559 1287 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 ALOX15BO15296 676 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 BCAT2O15382 392 aaPredicted RBP15.13■□□□□ 0.01
LIMS4-201ENST00000413601 RAMP2O60895 175 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 ZNF821O75541 412 aaPredicted RBP15.13■□□□□ 0.01
LIMS4-201ENST00000413601 CTSLP07711 333 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 MIPP30301 263 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 ETFBP38117 255 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 SERPINH1P50454 418 aaKnown RBP15.13■□□□□ 0.01
LIMS4-201ENST00000413601 CLCN6P51797 869 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 SLC20A2Q08357 652 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 POLD3Q15054 466 aaPredicted RBP15.13■□□□□ 0.01
LIMS4-201ENST00000413601 CA9Q16790 459 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 UAP1L1Q3KQV9 507 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 ERMARDQ5T6L9 678 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 FAM46CQ5VWP2 391 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 DAB2IPQ5VWQ8 1189 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 KIAA0895LQ68EN5 471 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 ALKBH5Q6P6C2 394 aaKnown RBP15.13■□□□□ 0.01
LIMS4-201ENST00000413601 VSTM4Q8IW00 320 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 RTL3Q8N8U3 475 aaKnown RBP15.13■□□□□ 0.01
LIMS4-201ENST00000413601 CHST14Q8NCH0 376 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 OR2I1PQ8NGU4 316 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 OR14C36Q8NHC7 312 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 C1orf216Q8TAB5 229 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 CCDC114Q96M63 670 aa15.13■□□□□ 0.01
LIMS4-201ENST00000413601 SNRNP25Q9BV90 132 aaKnown RBP15.13■□□□□ 0.01
LIMS4-201ENST00000413601 DHX35Q9H5Z1 703 aaKnown RBP15.13■□□□□ 0.01
LIMS4-201ENST00000413601 NOL6Q9H6R4 1146 aaKnown RBP15.13■□□□□ 0.01
LIMS4-201ENST00000413601 FCF1Q9Y324 198 aaKnown RBP15.13■□□□□ 0.01
LIMS4-201ENST00000413601 FARP1Q9Y4F1 1045 aaPredicted RBP15.13■□□□□ 0.01
LIMS4-201ENST00000413601 ANKRD36A6QL64 1941 aa15.12■□□□□ 0.01
LIMS4-201ENST00000413601 MED19A0JLT2 244 aaPredicted RBP15.12■□□□□ 0.01
LIMS4-201ENST00000413601 LRRC72A6NJI9 287 aa15.12■□□□□ 0.01
LIMS4-201ENST00000413601 C1QTNF3-AMACRE9PGA6 284 aa15.12■□□□□ 0.01
LIMS4-201ENST00000413601 PRPSAP2O60256 369 aa15.12■□□□□ 0.01
LIMS4-201ENST00000413601 LRCH4O75427 683 aa15.12■□□□□ 0.01
LIMS4-201ENST00000413601 CD160O95971 181 aa15.12■□□□□ 0.01
LIMS4-201ENST00000413601 IGHV4-34P06331 123 aa15.12■□□□□ 0.01
LIMS4-201ENST00000413601 SYPP08247 313 aa15.12■□□□□ 0.01
LIMS4-201ENST00000413601 HNRNPH3P31942 346 aaKnown RBP15.12■□□□□ 0.01
LIMS4-201ENST00000413601 CHRNA3P32297 505 aa15.12■□□□□ 0.01
LIMS4-201ENST00000413601 EIF4A3P38919 411 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms