RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 FAM131BQ86XD5 332 aa17.55■□□□□ 0.4
PTPRC-206ENST00000413409 THEM5Q8N1Q8 247 aa17.55■□□□□ 0.4
PTPRC-206ENST00000413409 ATP11CQ8NB49 1132 aa17.55■□□□□ 0.4
PTPRC-206ENST00000413409 SMARCD2Q92925 531 aa17.55■□□□□ 0.4
PTPRC-206ENST00000413409 CORO1BQ9BR76 489 aa17.55■□□□□ 0.4
PTPRC-206ENST00000413409 C10orf88Q9H8K7 445 aa17.55■□□□□ 0.4
PTPRC-206ENST00000413409 VPS45Q9NRW7 570 aa17.55■□□□□ 0.4
PTPRC-206ENST00000413409 MTRRQ9UBK8 725 aa17.55■□□□□ 0.4
PTPRC-206ENST00000413409 PCDHGA5Q9Y5G8 931 aa17.55■□□□□ 0.4
PTPRC-206ENST00000413409 CDY1Q9Y6F8 540 aa17.55■□□□□ 0.4
PTPRC-206ENST00000413409 E7EVH7 732 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 KCNN4O15554 427 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 MOSPD3O75425 235 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 LTFP02788 710 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 ATXN8OSP0DMR3 200 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 PHBP35232 272 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 BRCC3P46736 316 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 MLLT6P55198 1093 aaPredicted RBP17.54■□□□□ 0.4
PTPRC-206ENST00000413409 IFI35P80217 286 aaPredicted RBP17.54■□□□□ 0.4
PTPRC-206ENST00000413409 DEUP1Q05D60 604 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 PDIA2Q13087 525 aaKnown RBP17.54■□□□□ 0.4
PTPRC-206ENST00000413409 NR1H3Q13133 447 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 NCBP2-AS2Q69YL0 99 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 OVOS1Q6IE37 1185 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 BHLHA9Q7RTU4 235 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 GPRIN1Q7Z2K8 1008 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 ZBED8Q8IZ13 594 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 PDIK1LQ8N165 341 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 BCAS4Q8TDM0 211 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 RNF139Q8WU17 664 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 RSPRY1Q96DX4 576 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 OLFM3Q96PB7 478 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 EDEM2Q9BV94 578 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 KLC2Q9H0B6 622 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 SLC24A2Q9UI40 661 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 HEY1Q9Y5J3 304 aa17.54■□□□□ 0.4
PTPRC-206ENST00000413409 EXOC1LA0A1B0GW35 172 aa17.53■□□□□ 0.4
PTPRC-206ENST00000413409 SLC38A8A6NNN8 435 aa17.53■□□□□ 0.4
PTPRC-206ENST00000413409 M0QYT0 321 aa17.53■□□□□ 0.4
PTPRC-206ENST00000413409 TRAPPC3O43617 180 aa17.53■□□□□ 0.4
PTPRC-206ENST00000413409 FYNP06241 537 aa17.53■□□□□ 0.4
PTPRC-206ENST00000413409 FGFR3P22607 806 aa17.53■□□□□ 0.4
PTPRC-206ENST00000413409 RBL1P28749 1068 aa17.53■□□□□ 0.4
PTPRC-206ENST00000413409 CACNA2D1P54289 1103 aa17.53■□□□□ 0.4
PTPRC-206ENST00000413409 HNRNPH2P55795 449 aaKnown RBP17.53■□□□□ 0.4
PTPRC-206ENST00000413409 BASP1P80723 227 aaKnown RBP17.53■□□□□ 0.4
PTPRC-206ENST00000413409 FASTKD3Q14CZ7 662 aaKnown RBP17.53■□□□□ 0.4
PTPRC-206ENST00000413409 TTC19Q6DKK2 380 aaPredicted RBP17.53■□□□□ 0.4
PTPRC-206ENST00000413409 PM20D1Q6GTS8 502 aa17.53■□□□□ 0.4
PTPRC-206ENST00000413409 PKN3Q6P5Z2 889 aa17.53■□□□□ 0.4
PTPRC-206ENST00000413409 MFSD6LQ8IWD5 586 aa17.53■□□□□ 0.4
PTPRC-206ENST00000413409 NDRG1Q92597 394 aaKnown RBP17.53■□□□□ 0.4
PTPRC-206ENST00000413409 ZC3H10Q96K80 434 aaKnown RBP17.53■□□□□ 0.4
PTPRC-206ENST00000413409 SELENOSQ9BQE4 189 aa17.53■□□□□ 0.4
PTPRC-206ENST00000413409 CCDC134Q9H6E4 229 aa17.53■□□□□ 0.4
PTPRC-206ENST00000413409 ARHGEF4Q9NR80 690 aa17.53■□□□□ 0.4
PTPRC-206ENST00000413409 TMEM30AQ9NV96 361 aa17.53■□□□□ 0.4
PTPRC-206ENST00000413409 XPO7Q9UIA9 1087 aaKnown RBP17.53■□□□□ 0.4
PTPRC-206ENST00000413409 RAD54BQ9Y620 910 aa17.53■□□□□ 0.4
PTPRC-206ENST00000413409 YJEFN3A6XGL0 299 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 E7ENQ6 273 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 I3L4J1 428 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 CAPN9O14815 690 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 GCATO75600 419 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 SPAG6O75602 509 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 F9P00740 461 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 GOT1P17174 413 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 PITX1P78337 314 aaPredicted RBP17.52■□□□□ 0.4
PTPRC-206ENST00000413409 GBE1Q04446 702 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 DPYSQ14117 519 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 DGKKQ5KSL6 1271 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 C4orf50Q6ZRC1 276 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 EXOC3L1Q86VI1 746 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 NLRP14Q86W24 1093 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 HS6ST3Q8IZP7 471 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 MCUQ8NE86 351 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 OR10T2Q8NGX3 314 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 DEPDC1BQ8WUY9 529 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 ARHGEF2Q92974 986 aaKnown RBP17.52■□□□□ 0.4
PTPRC-206ENST00000413409 XPO6Q96QU8 1125 aaKnown RBP17.52■□□□□ 0.4
PTPRC-206ENST00000413409 TRPV4Q9HBA0 871 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 PIGVQ9NUD9 493 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 DTLQ9NZJ0 730 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 ADAMTS20P59510 1910 aa17.52■□□□□ 0.4
PTPRC-206ENST00000413409 C5orf60A6NFR6 353 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 NDUFAB1O14561 156 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 FAM107AO95990 144 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 CHN1P15882 459 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 GJA1P17302 382 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 TPSB2P20231 275 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 HCAR3P49019 387 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 SEMA3BQ13214 749 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 CCINQ13939 588 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 PAFAH1B3Q15102 231 aaKnown RBP17.51■□□□□ 0.39
PTPRC-206ENST00000413409 TPSAB1Q15661 275 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 SKIDA1Q1XH10 827 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 KLHL38Q2WGJ6 581 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 PLK5Q496M5 336 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 CCDC38Q502W7 563 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 FNBP1LQ5T0N5 605 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms