RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 CFAP57Q96MR6 1250 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZNF578Q96N58 590 aaPredicted RBP-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 AGAP3Q96P47 875 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 PIP5K1AQ99755 562 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 PKP2Q99959 881 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZNF2Q9BSG1 426 aaPredicted RBP-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 POLR3CQ9BUI4 534 aaPredicted RBP-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 ELOVL1Q9BW60 279 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 LGR4Q9BXB1 951 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 ACTRT3Q9BYD9 372 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 SLC25A18Q9H1K4 315 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 ST6GALNAC4Q9H4F1 302 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 Q9N2K0 584 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 COPRSQ9NQ92 184 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 TMEM106BQ9NUM4 274 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 TMEM160Q9NX00 188 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 PSORS1C2Q9UIG4 136 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 SLC8A2Q9UPR5 921 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 FOXJ3Q9UPW0 622 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 ANKRD6Q9Y2G4 727 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 PPP2R3BQ9Y5P8 575 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 SEC23IPQ9Y6Y8 1000 aaKnown RBP-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 COL4A5P29400 1685 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 DOPEY2Q9Y3R5 2298 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 TLN2Q9Y4G6 2542 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 MED13LQ71F56 2210 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 ASTN1O14525 1302 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 IGSF9BQ9UPX0 1349 aa-1.4□□□□□ -2.63
RNU4-88P-201ENST00000411220 CSMD2Q7Z408 3487 aa-1.41□□□□□ -2.63
RNU4-88P-201ENST00000411220 POLEQ07864 2286 aa-1.41□□□□□ -2.63
RNU4-88P-201ENST00000411220 IGLV2-18A0A075B6J9 118 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 IGKV1-12A0A0C4DH73 117 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 FAM171A2A8MVW0 826 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 F6X3S4 739 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 F8W810 466 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 K7N7A8 449 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 SH2B2O14492 632 aaPredicted RBP-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 CTAG2O75638 210 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 LY86O95711 162 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 PRLP01236 227 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 IGKV1D-12P01611 117 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 SOD2P04179 222 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 ITGB8P26012 769 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 MARK3P27448 753 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 SSTR1P30872 391 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 IGFALSP35858 605 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 KCNJ6P48051 423 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 BCAR1P56945 870 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 SRPXP78539 464 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 CD69Q07108 199 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 LTB4RQ15722 352 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 C15orf32Q32M92 178 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 VWA2Q5GFL6 755 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZC3H12BQ5HYM0 836 aaKnown RBP-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 EARS2Q5JPH6 523 aaKnown RBP-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 FAM47AQ5JRC9 791 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 PITRM1Q5JRX3 1037 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 FAM69BQ5VUD6 431 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 CTRB2Q6GPI1 263 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 SLFN12LQ6IEE8 588 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 LCTLQ6UWM7 567 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 VITQ6UXI7 678 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 SPNS3Q6ZMD2 512 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 ESPNLQ6ZVH7 1005 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 PARS2Q7L3T8 475 aaKnown RBP-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 FJX1Q86VR8 437 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 DNAAF5Q86Y56 855 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 EGFL6Q8IUX8 553 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 C11orf42Q8N5U0 333 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 PUM2Q8TB72 1066 aaKnown RBP eCLIP-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 INPP5DQ92835 1189 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 E2F7Q96AV8 911 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 BICD1Q96G01 975 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 MRGPRX3Q96LB0 322 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 CCDC140Q96MF4 163 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 PIGQQ9BRB3 760 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 ORAI3Q9BRQ5 295 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 WDR83Q9BRX9 315 aaKnown RBP-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 THAP7Q9BT49 309 aaPredicted RBP-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 NOC4LQ9BVI4 516 aaKnown RBP-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 HES7Q9BYE0 225 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 TRIM6Q9C030 488 aaPredicted RBP-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 RACGAP1Q9H0H5 632 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 IKZF5Q9H5V7 419 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 YY1AP1Q9H869 796 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 UBTD1Q9HAC8 227 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 FBRSL1Q9HCM7 1045 aaKnown RBP-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 KCNQ5Q9NR82 932 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 SIRT3Q9NTG7 399 aaPredicted RBP-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 PLCXD1Q9NUJ7 323 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 DHCR7Q9UBM7 475 aaKnown RBP-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 RASAL2Q9UJF2 1139 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF391Q9UJN7 358 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 MTMR7Q9Y216 660 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 MOB4Q9Y3A3 225 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 SPG11Q96JI7 2443 aa-1.41□□□□□ -2.64
RNU4-88P-201ENST00000411220 COL14A1Q05707 1796 aaKnown RBP-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 LMTK3Q96Q04 1460 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 TRBV5-3A0A0A0MS03 114 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 A0A1W2PS18 150 aa-1.42□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms