RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 FAM126BQ8IXS8 530 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 NSMCE1Q8WV22 266 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 OVCA2Q8WZ82 227 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 SPOCK2Q92563 424 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 ZNF669Q96BR6 464 aaPredicted RBP13.83□□□□□ -0.2
LIMS1-205ENST00000410093 LRCH3Q96II8 777 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 GORASP1Q9BQQ3 440 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 MLPHQ9BV36 600 aaPredicted RBP13.83□□□□□ -0.2
LIMS1-205ENST00000410093 SLC13A1Q9BZW2 595 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 ZYG11BQ9C0D3 744 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 SIK2Q9H0K1 926 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 VPS45Q9NRW7 570 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 PCMTD2Q9NV79 361 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 TMEM248Q9NWD8 314 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 HSFX1Q9UBD0 423 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 LNPEPQ9UIQ6 1025 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 SORCS3Q9UPU3 1222 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 CHKBQ9Y259 395 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 ANKRD6Q9Y2G4 727 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 GREB1Q4ZG55 1949 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 IGLV3-10A0A075B6K4 115 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 ZCWPW2A0A1B0GU75 182 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 WDR91A4D1P6 747 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 DFFAO00273 331 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 SOX1O00570 391 aaPredicted RBP13.82□□□□□ -0.2
LIMS1-205ENST00000410093 PIAS1O75925 651 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 NEBLO76041 1014 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 TYK2P29597 1187 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 SLC8A1P32418 973 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 TMPRSS15P98073 1019 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 PPIGQ13427 754 aaKnown RBP eCLIP13.82□□□□□ -0.2
LIMS1-205ENST00000410093 LAMB3Q13751 1172 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 SHHQ15465 462 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 SPRED3Q2MJR0 410 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 FBXW10Q5XX13 1052 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 NPAS4Q8IUM7 802 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 ARMC2Q8NEN0 867 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 ERP27Q96DN0 273 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 CASD1Q96PB1 797 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 TBL1YQ9BQ87 522 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 PPP1R12CQ9BZL4 782 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 LRMDAQ9H2I8 198 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 NPHS2Q9NP85 383 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 ZFP69BQ9UJL9 534 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 HS3ST4Q9Y661 456 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 TTC3P53804 2025 aa13.82□□□□□ -0.2
LIMS1-205ENST00000410093 UGT1A9O60656 530 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 SNNO75324 88 aaPredicted RBP13.81□□□□□ -0.2
LIMS1-205ENST00000410093 AMHP03971 560 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 ALDOAP04075 364 aaKnown RBP13.81□□□□□ -0.2
LIMS1-205ENST00000410093 DLDP09622 509 aaKnown RBP13.81□□□□□ -0.2
LIMS1-205ENST00000410093 COL6A2P12110 1019 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 BGNP21810 368 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 IBSPP21815 317 aaPredicted RBP13.81□□□□□ -0.2
LIMS1-205ENST00000410093 YBEYP58557 167 aaPredicted RBP13.81□□□□□ -0.2
LIMS1-205ENST00000410093 ELF3P78545 371 aaPredicted RBP13.81□□□□□ -0.2
LIMS1-205ENST00000410093 STX3Q13277 289 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 BMPR2Q13873 1038 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 BTG3Q14201 252 aaPredicted RBP13.81□□□□□ -0.2
LIMS1-205ENST00000410093 KRT72Q14CN4 511 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 TEDDM1Q5T9Z0 273 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 FAM171A1Q5VUB5 890 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 PKN3Q6P5Z2 889 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 CDHR3Q6ZTQ4 885 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 KCNMB4Q86W47 210 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 CNTN4Q8IWV2 1026 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 PDZD8Q8NEN9 1154 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 PPHLN1Q8NEY8 458 aaKnown RBP13.81□□□□□ -0.2
LIMS1-205ENST00000410093 FBXO32Q969P5 355 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 CEP41Q9BYV8 373 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 SLC39A8Q9C0K1 460 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 WWP1Q9H0M0 922 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 MYLK2Q9H1R3 596 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 SLC25A51Q9H1U9 297 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 HIPK3Q9H422 1215 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 UGT1A7Q9HAW7 530 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 UGT1A10Q9HAW8 530 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 UGT1A8Q9HAW9 530 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 NMUR1Q9HB89 426 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 ARNT2Q9HBZ2 717 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.81□□□□□ -0.2
LIMS1-205ENST00000410093 SFMBT1Q9UHJ3 866 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 TBX21Q9UL17 535 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 PRG3Q9Y2Y8 225 aaPredicted RBP13.81□□□□□ -0.2
LIMS1-205ENST00000410093 HBS1LQ9Y450 684 aaKnown RBP13.81□□□□□ -0.2
LIMS1-205ENST00000410093 TANC1Q9C0D5 1861 aa13.81□□□□□ -0.2
LIMS1-205ENST00000410093 TPP1O14773 563 aa13.8□□□□□ -0.2
LIMS1-205ENST00000410093 CHUKO15111 745 aa13.8□□□□□ -0.2
LIMS1-205ENST00000410093 TBC1D4O60343 1298 aa13.8□□□□□ -0.2
LIMS1-205ENST00000410093 CCDC22O60826 627 aa13.8□□□□□ -0.2
LIMS1-205ENST00000410093 SNUPNO95149 360 aaKnown RBP13.8□□□□□ -0.2
LIMS1-205ENST00000410093 ITGB8P26012 769 aa13.8□□□□□ -0.2
LIMS1-205ENST00000410093 MAPKAPK2P49137 400 aa13.8□□□□□ -0.2
LIMS1-205ENST00000410093 OCRLQ01968 901 aa13.8□□□□□ -0.2
LIMS1-205ENST00000410093 PDE1CQ14123 709 aaPredicted RBP13.8□□□□□ -0.2
LIMS1-205ENST00000410093 PARP15Q460N3 678 aa13.8□□□□□ -0.2
LIMS1-205ENST00000410093 FUT10Q6P4F1 479 aa13.8□□□□□ -0.2
LIMS1-205ENST00000410093 STRA8Q7Z7C7 330 aa13.8□□□□□ -0.2
LIMS1-205ENST00000410093 TP53INP2Q8IXH6 220 aa13.8□□□□□ -0.2
LIMS1-205ENST00000410093 CNTD1Q8N815 330 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms